Streptococcus ilei I-G2: N596_06190
Help
Entry
N596_06190 CDS
T02879
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sig
Streptococcus ilei I-G2
Pathway
sig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N596_06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sig03019
]
N596_06190
Messenger RNA biogenesis [BR:
sig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N596_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
17316471
NCBI-ProteinID:
AGY40382
LinkDB
All DBs
Position
1257380..1259062
Genome browser
AA seq
560 aa
AA seq
DB search
MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVENIDRVKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRGAKL
YEINQNTELTFKHIKATFFRTTHSIPEPLGIVLHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRLQ
QAADAAVKTGRKIVVFGRSMEKAIVNGIELGYIKVPPGTIIEPSEIKDYPANEILIMCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNRLINIISEAGVDVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKIHAGLARDCGVEKDNIFIMSNG
DVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRKDLSEDGVVLAVATVDFKSKM
ILAGPDILSRGFIYMRESGDLIRESQRILFNAIRIALKNKDANIQTVHGAIVNALRPFLY
ESTEREPIIIPMILTPDEEN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcatataccttaaaacctgaagaagttggtgttttcgccattggaggtctcggggaa
atcggtaaaaatacctatgggattgaataccaagacgaaatcatcattgtggatgctggg
attaagttccctgaagatgatttgttagggattgattacgtgattcctgactattcctat
atcgttgaaaatatcgaccgtgtcaaaggtgtcttgattacccacggacacgaagaccat
atcggaggaattcccttcctcttgaaacaagctaatgtaccaatctatgctggacctttg
gctctagcccttattcgtggaaaattggaagagcatggcctccttcgtggtgccaaactc
tatgaaatcaaccaaaatacggagctgacctttaagcatattaaagcgaccttcttccgg
acgacccactccattccagaacctttggggattgttcttcatacgcctcaaggaaaaatc
gtctgcacgggagactttaaatttgacttcacacctgttggggagccggccgaccttcac
cggatggctgcactaggagaggaaggcgtcctctgtctgctttctgactcaaccaacgcg
gaagtcccaacctttaccaactctgaaaaagtcgttggccaatccattatgaagattatt
gaaggcattcatggacgcatcatctttgcttcctttgcctcaaacatcttccgtctccaa
caggctgcagatgccgctgttaaaacgggccgtaagattgttgtctttggacgctcgatg
gaaaaagccattgtcaacgggattgagctgggctatatcaaggtaccacctggaacaatt
attgaaccaagtgagatcaaagactacccggcaaacgaaatcctcattatgtgtacagga
agccaaggggagccaatggcggcactgtctcgtatcgctaatggaacccaccgccaagtg
caattgcaaccgggtgataccgttatcttctcatctagtccaattcctggcaacacaacg
agcgtcaaccgcctgatcaacatcatctctgaagcaggagtcgatgtcatccacggtaag
attaacaatatccatacctctggacacggtggtcaacaagaacaaaagctcatgttgcgc
ttgatcaagccaaaatacttcatgcctgttcacggtgagtaccgcatgcagaaaattcat
gctggacttgcgcgtgattgcggagtagaaaaggataacatcttcatcatgagcaacggt
gatgtccttgccttaacagccaactcggctcgtatcgcaggaagtttcaatgctcaagat
atctatgtcgacggaaatcgcatcggagaaatcggagctgctgtccttcgtgaccgcaaa
gatttatcagaagatggtgttgtcctagctgttgcgacagttgacttcaagtcaaaaatg
attttagctggaccagatattctcagtcgtggtttcatctatatgagagagtctggtgac
ctgatccgtgaaagtcaacgtatcctcttcaatgctatccgaatcgccttgaagaacaaa
gatgccaacattcaaaccgtacacggtgctattgtcaatgccctccgtcctttcctttac
gaaagtacggaacgtgaacccatcatcatcccgatgattttgacaccagatgaagaaaat
taa
DBGET
integrated database retrieval system