Saccharolobus islandicus HVE10/4: SiH_1226
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Entry
SiH_1226 CDS
T01952
Name
(GenBank) Zinc finger TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
sih
Saccharolobus islandicus HVE10/4
Pathway
sih03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sih00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SiH_1226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sih03021
]
SiH_1226
Transcription machinery [BR:
sih03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SiH_1226
Prokaryotic type
Archaeal type
TFB
SiH_1226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
DUF7351
Sigma70_r4
Lar_restr_allev
Zn_ribbon_RRN7
Zn_Ribbon_Prim
Zn_Ribbon_1
Zn_ribbon_LysW
Zn_ribbon_Elf1
HEAT_Maestro
HTH_Tnp_ISL3
Ribosomal_S27e
Zn_ribbon_NrdR
Zn_ribbon_IS1595
Zn_Ribbon_YjdM
DUF7573
DUF8122
Motif
Other DBs
NCBI-ProteinID:
ADX82575
UniProt:
F0NQZ2
LinkDB
All DBs
Position
1234796..1235677
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AA seq
293 aa
AA seq
DB search
MKCPFCGTEDTITYDMEKGMYVCTNCGSVIEDNAVDPGPDWRAYNAKDRNEKERVGSPST
PKVHDWGFHTIIGYGRAKDRLKTLKMQRMQNKIRVSPKDKKLVTLLSILNDESSKLELPE
HVKETASLIIRKMVETGQTKRIDQYTLIVAALYYSCQVNNVPRHLQEFKVRYSISSSEFW
NALKRVQSVAKSIPDFRPKIRPTEYIPKIIYRLNLPPIIGTKASEVVDLMHKQGLTSGKG
YLSLSAASVYLISALMDIKKTQKEVADSLDITEVTIRNRYKDIVDNFDIIVTL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtccattttgtggaacggaggacacaataacatatgatatggaaaagggaatg
tacgtatgtacaaactgcggcagtgtaatagaagataatgcagtagatccaggtccagat
tggagagcctataacgcaaaagacagaaatgagaaagagagagtaggtagcccaagtact
ccaaaagtacatgactggggatttcatactataataggatacggtagagctaaggacaga
ctaaaaacattaaagatgcaaagaatgcaaaataagatacgtgtgtcacctaaggataaa
aagctagtcaccttactttctattttaaatgatgagagttcaaaattagagttaccagaa
catgtcaaagaaactgcatcgttaataataaggaaaatggtagaaactggacaaaccaaa
aggatagatcagtatacgctaatagttgctgccttatattattcttgccaagtgaataac
gtaccaagacacctccaagagtttaaagttagatattccatatcttctagcgaattttgg
aacgccttaaagagagttcaatctgttgcaaaatcaataccggactttcgtcctaaaatc
agaccaacagaatatataccaaaaataatatacagattaaatttaccaccaattatagga
acaaaggcatccgaggtagtagacttaatgcataaacaagggctgactagcggaaaagga
tacttatctttaagcgcagcttcggtttacttaatatcggcactaatggatataaaaaag
acgcagaaagaggttgcagactcgttagatattactgaagtaactattaggaatagatat
aaggatatagtggataattttgatattattgttacattatga
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