Saccharolobus islandicus HVE10/4: SiH_1258
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Entry
SiH_1258 CDS
T01952
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sih
Saccharolobus islandicus HVE10/4
Brite
KEGG Orthology (KO) [BR:
sih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sih03032
]
SiH_1258
03400 DNA repair and recombination proteins [BR:
sih03400
]
SiH_1258
Enzymes [BR:
sih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SiH_1258
DNA replication proteins [BR:
sih03032
]
Prokaryotic type
DNA Topoisomerases
SiH_1258
DNA repair and recombination proteins [BR:
sih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SiH_1258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF6848
Motif
Other DBs
NCBI-ProteinID:
ADX82607
UniProt:
F0NR24
LinkDB
All DBs
Position
complement(1264307..1266340)
Genome browser
AA seq
677 aa
AA seq
DB search
MNLCNVNNYYLIIAEKSKAAKKIAEALSEKPILCRKYNVNYWIIKDHDNNKYVIVPAAGH
LFGLQGKSGFPVYDADWKPLWEIDKNSYYTKRYYQLISSLSKYALGFINACDYDIEGSVI
GYLIIKYLGDTKKAKRMKFSALTKSDILSAFRNVSTLDYDMINAGVARHKIDWLWGINVS
RALMISLQDFAKKRVILSAGRVQSPTLVQVVNSEIERNLFIPLPKFTVSVIVKIKDYSLN
IKINKEFEKLAEANEFLNRLINKTVKVTQVENKIRILERPPPFNLTDLQVEAGRIYGISP
YNVERIAEDLYLDGLISYPRTNSQKIPSTINIYNIIKGLENSSYRKLVNLVRKITGGKYI
VRQGVKDDPAHPAIHPTGEPPKNLPNNKFKIYDLIARRFLASVSADAKLSNTIYTLKVAD
FPLEFSVSYTKIPERNWLDIYHFHNVREDNSILLSKGDEGIISDGKVNISLSKPTSRYTK
VSLLKWMESSDLGTEATRGRIIEILVKRRYLTSNGRYIVPTKLGFYIAELLNKFFPDIVD
VRMTADMENKLEMIKTGKILESEVIKENIEKLNKFIEEYKANKDRVGESLAKALGLIKIV
KCKFCDLEQYKDGLCKYHYEAKTKLLDAVRIWEERTKYDHKKILKRISSSKSTGKYVKDI
VTYMLNMNDESHANLKR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatgtaatgtaaacaactattaccttataattgcagaaaagtcaaaagcagct
aaaaaaattgctgaagctctttcagagaaacctattttatgtagaaaatacaacgttaac
tattggataataaaagatcatgataacaataaatatgttattgtccctgcggcaggacat
ctttttgggttacaagggaagagtggtttccctgtatatgatgccgactggaaaccttta
tgggagattgataagaatagttactacacaaaaaggtactatcaacttatctcgtctctt
agcaagtacgctttaggctttatcaatgcatgtgattacgacatagaaggttctgtaatt
ggctatttaataatcaaatatctgggtgatactaagaaggctaaacgaatgaaattttca
gcgctgactaaaagtgacatattatcggcatttagaaatgtgtctacattagattacgat
atgataaacgctggagtagctaggcataaaattgactggttatggggaattaatgttagt
agagctcttatgatttctttacaagatttcgcaaagaaaagagtgatattaagtgcgggc
agggttcaaagcccaactctcgtccaagttgtcaactcggaaattgaaagaaacctattt
attccattacctaaattcactgtttcagttattgtaaaaattaaagattattcactgaat
attaagataaataaagaattcgaaaaacttgctgaagcaaacgaatttttgaatagatta
ataaataaaaccgtaaaagttacgcaagttgaaaataagattagaatattagaaagacct
cctccatttaatctcactgatctccaggtagaagctggcagaatatatggtatatctcca
tataacgtagaacgtatagcagaagatctttatttggacggactaataagttacccaaga
actaatagtcaaaaaataccttcaactattaatatttacaatataatcaaaggtttggag
aatagttcgtatagaaagctagttaatttagtgaggaaaattacaggagggaaatatata
gttaggcaaggcgttaaggacgaccccgcacatcccgcaattcaccctactggcgaacct
cctaaaaatttacctaataacaaattcaagatatatgacctaatagcaagaagatttttg
gcttcagtatctgccgatgctaaactatcaaacactatttacaccttgaaagtggctgat
tttcccttagagttctcagtctcatatacaaaaataccagagagaaattggctagatata
tatcactttcataatgtaagagaagataattcaatacttctctcaaaaggtgatgagggt
ataatttcagatggaaaagtaaatattagtttaagtaaacccacttctagatatacaaag
gtttcattacttaaatggatggaatcttctgacttaggtacagaggctactagaggaaga
ataattgagatcctagtgaagaggagatatttgactagtaacgggcgctatatagtcccg
acaaaattaggtttctatattgctgagctattaaacaaatttttcccggatatagttgat
gttagaatgactgcagatatggaaaataaattagaaatgataaagactggcaaaatttta
gaaagcgaggttattaaagaaaatatagaaaaattaaataaatttatagaggaatataag
gcaaataaagatagagtaggagagtccttagctaaagctttaggccttataaaaattgta
aagtgtaaattttgtgatctggagcagtataaggatggattatgtaaatatcactatgaa
gccaaaactaagcttttagatgctgtgagaatttgggaggaaaggacaaaatacgatcat
aaaaagattttaaagagaatcagtagtagtaaatcaacgggtaaatacgtaaaagatata
gtaacttacatgcttaacatgaatgatgaaagtcatgccaatctgaaaagatga
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