Saccharolobus islandicus HVE10/4: SiH_1641
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Entry
SiH_1641 CDS
T01952
Name
(GenBank) archaeal intron splicing enzyme, alpha subunit
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sih
Saccharolobus islandicus HVE10/4
Brite
KEGG Orthology (KO) [BR:
sih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sih03016
]
SiH_1641
Enzymes [BR:
sih01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SiH_1641
Transfer RNA biogenesis [BR:
sih03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SiH_1641
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
ADX82989
UniProt:
F0NKM7
LinkDB
All DBs
Position
1596882..1597430
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AA seq
182 aa
AA seq
DB search
MVKALLVGSKVLIPNVDESRYIYSNGFYGKAIGISKPKGPKDIIRPLELSLIESVYLAKK
GLIKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYT
LGPGLEHAPYVVIAVDIDEEITPHELLSFGRVSHSTRKRLVLALVDRKSESVRYIMFKWV
KM
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagccttattggtgggatctaaggtattaatcccaaatgtagatgaatcaaga
tacatttattcaaacggtttctatggaaaggcaataggaatttctaagccgaagggccct
aaagatataattagacctttagaattatcattaattgaaagcgtctatctagccaaaaag
ggtttaattaaagttatcgataaaaatggtgaagttcttgaatatgagaaattatatgaa
tatagttctaaaataataaataaatttgatatcatgtacagagtttacgaagacctgagg
gaaaaaggattcatagttagatctggagtaaagtatggagcagattttgcagtatacacg
ttaggacctggattagaacatgcaccttatgtggttattgcagtggatattgacgaagaa
attactcctcatgagttattgagttttgggagagtctcccacagcacaaggaaaagatta
gtattggctctagtagatcgcaaaagtgaaagtgtgagatacataatgtttaaatgggtc
aaaatgtaa
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