Saccharolobus islandicus HVE10/4: SiH_1904
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Entry
SiH_1904 CDS
T01952
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sih
Saccharolobus islandicus HVE10/4
Pathway
sih04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SiH_1904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sih03019
]
SiH_1904
03009 Ribosome biogenesis [BR:
sih03009
]
SiH_1904
04131 Membrane trafficking [BR:
sih04131
]
SiH_1904
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sih04147
]
SiH_1904
Messenger RNA biogenesis [BR:
sih03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SiH_1904
Ribosome biogenesis [BR:
sih03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SiH_1904
Membrane trafficking [BR:
sih04131
]
SNARE
SNARE associated proteins
Others
SiH_1904
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SiH_1904
Exosome [BR:
sih04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SiH_1904
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_22
TIP49
AAA_14
AAA_33
IstB_IS21
AAA_28
nSTAND3
Mg_chelatase
Vps4_C
AAA_18
RNA_helicase
ABC_tran
ATPase_2
Parvo_NS1
Sigma54_activat
AAA_24
NPHP3_N
AAA_17
AAA_3
NB-ARC
AAA_lid_PRS2_C
TsaE
AAA_7
NACHT
Zeta_toxin
DUF815
ATP-synt_ab
Bac_DnaA
PhoH
ATPase
SPT16
Motif
Other DBs
NCBI-ProteinID:
ADX83251
LinkDB
All DBs
Position
complement(1832220..1834529)
Genome browser
AA seq
769 aa
AA seq
DB search
MSASSGEEQKPQRKELILRVMEARQKDVGRGKVRIDIDLLSQIDVSPGDVVEIEGTRKTA
ALAWPLSPEDTTTGEKDIIRMDGITRKNAGVSIGDKVIVRKAVVKPASTVKLAPSNFSIT
VDPGFISYVKKRLKEFPLVEGDTVLIPVLGQAIPFTVVQVKPAGIVLVNDDTIISISDKP
VEPSRYPRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKT
LLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPK
RDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLP
DKQGRLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDL
NQDKIPPEILESMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEV
VEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWV
GESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISYDSGVTERIVNQLLAEMDGIEKL
ENVVVIAATNRPDILDPALLRPGRFEKLIYVPPPDRRARIEILKVHTRNIVLGEDISLED
VAEKTEGYTGADLAALVREATMRAIRESMKICIEKTNESCKSTDTECKDKTMKECMKVNG
VKVSLRHFEEAMRKVKPSVTQDMLQFYQNWVEKARQQLPKTTVKPSTYA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctagttctggtgaggaacagaaaccgcaaagaaaggagttaatacttagagta
atggaagctagacagaaagatgtcggaagaggaaaagtgcgaattgatattgatttacta
tcgcaaattgatgtaagcccaggtgacgttgttgaaattgaaggaaccagaaagactgct
gcacttgcatggcctttatcgcctgaggatacaacaactggagaaaaggatataataaga
atggatggaataaccaggaaaaacgctggagtctcaattggagataaggttatagtaaga
aaagcagttgtaaagccagctagcacagtaaaattagcaccatctaacttctcaattact
gtagacccagggttcattagttatgttaagaaacgattaaaagaattccccctagttgaa
ggagatacggtattgattcctgtcctagggcaagccataccgtttactgtagtccaagtc
aaaccagcaggtatagttctagtgaatgacgatacgataataagcatatctgataagcca
gtagaaccttccagatatcctagagtcacatatgaggatataggtggaatgaaaaatatt
atagaaaaagtcagagagttagttgaattgcctttaagacatccagaactatttaagaga
ttaggaatagaaccacctaagggtatattattatatggtcctcctggagtgggaaagacg
ttactagcgaaagcaatagctaatgaaactgatgcatactttacttcaattaatggaccg
gaaataatgagcaaattctacggagagagtgagcaaagattaagggaaatatttgaagac
gctaaaaaacatgctcctgcaattattttcgtagatgaaatagacgcaatagcaccgaaa
agagacgaagtgataggagaagtagaaagaagagttgtcgcacagttactcactctaatg
gatggtcttgaaaatagaggaaacgtaatagtaatagctgcaaccaatagaccaagtgct
gttgatccagccctgagaaggccagggagatttgatagagagatagaaataccgttacca
gataaacaaggaagattggaaatattacaaatccatacaaggaatatgcctttatctaaa
gatgttgacctagagaagcttgcagatatgacacatggatatactggtgctgacttatct
gcattagtaagagaagctgcaatgaattccttaagaagatacttgccaaagatagatttg
aatcaagataagatacctccagaaatattagagtctatggaagttaagatggaagatttc
ataaacgcattcaaagaaatagtaccaagtggcttaagagaaatttacatagaagttcca
gaggttaaatggacagatataggtggcctcgaagaaataaaagaggagttaaaagaagta
gttgaatatcctctgaaatactcggagctataccaaaattctggtatagaaccacctaag
ggtatattgttatttggtccaccaggaactggaaagacgatgcttgcaaaggctgttgca
actgaaagcggagcaaacttcatagcagtaagaggaccagaaatattatccaaatgggta
ggtgaaagtgaaaaagcagttagggaaatatttagaaaagctagaatgtacgcgccggct
gtaatattctttgacgaaatagattcaatagctccaataagaggaatctcttacgattct
ggagtaacggagagaatagtaaatcaactattagcggaaatggatggaattgaaaaatta
gaaaacgtagtagtaatagctgcaaccaatagaccagatatcttagatccagcactatta
agaccaggaaggtttgagaaattaatttacgtacctccaccagacaggagagcaagaata
gaaatattaaaagttcatactaggaacatagtgttaggggaggacatcagcttagaggat
gtagctgaaaagactgaaggttataccggagctgatttagctgcactggtaagagaagct
acaatgagagctataagggagagcatgaaaatatgtatagagaaaaccaacgagagttgt
aaatccactgacactgagtgcaaagataaaactatgaaagagtgtatgaaggttaacggg
gttaaggtttccttgagacatttcgaagaagctatgaggaaagttaagccatcagttacg
caagatatgctgcaattctatcaaaattgggtagaaaaagctaggcagcaattgcccaaa
actaccgttaaaccaagtacatatgcgtga
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