Saccharolobus islandicus L.D.8.5: LD85_0063
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Entry
LD85_0063 CDS
T01158
Name
(GenBank) Rad50 zinc hook
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sii
Saccharolobus islandicus L.D.8.5
Brite
KEGG Orthology (KO) [BR:
sii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sii03400
]
LD85_0063
DNA repair and recombination proteins [BR:
sii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LD85_0063
Archaeal homologous recombinant proteins
LD85_0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
AAA_21
AAA_13
ABC_tran
AAA_29
GAS
AAA_27
SbcC_Walker_B
TMF_TATA_bd
Filament
Zw10_N
Nuf2_DHR10-like
Laminin_II
DUF7575
ATG17_like
RsgA_GTPase
DUF2203
Motif
Other DBs
NCBI-ProteinID:
ADB85867
UniProt:
D2PDY1
LinkDB
All DBs
Position
complement(52927..55521)
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AA seq
864 aa
AA seq
DB search
MRIDKITLTNFLSHEHSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNLI
RKGSNKASVTLHLSNEKDKIEIIRDIRSTTEDRLIRNQIPVARSATVVSNEIEKILGIDK
DIALSTIIVRQGELDKILENLQDIMGKILKLESIEKLIDSRGPIVEFKKNLENKLRELDR
IEQDYNDSKKNLEEKRNRVLELEKDRKKLEDEIKNLENQITELKKQFEDYEKKRNQYLEL
TTILKVKETKLNELNKSIEELRRQTENMDKLEKEVNELDNLKNFRLKFEKYEVLSRSYIE
ISNNILNLEKEIEEYEKAIKRKKELEPHYLRYKELERKLEELQPKHEEYLKSKSNLDSKL
NLKERLEKDASEFSKDIDRIGNLEQIMEEKRKRQLDLRAQLGKVESLISEKNEIINNLSQ
VKGETCPVCGRPLDEEHKQKIVEEAKSYISRLELDKNELEEELKKTTDELNKIEKEYRKL
SNNKANYDNVIKQLRKLNEEIENLHNRIEALKDIEEEIKKINVEIKDLKQYYEEFMRLFK
YDEKELERKKNRLDEMNKKKVEIEKEMRALETELQGLDRKELENKISDLERKKKILDEMK
KKRGVLEDYIGQVELLQEDVKKLREKLNIIQFDENKYNELKTSLDVHNASLKEKENRKSR
VEGELDSLGKDIEEISNRIKNYELQLKDKEKIINGINKLEKIRDALGERKLQSYIIMATK
QLIENNLNDIISKFDLSIKNVEMEIMPKTSRGKGSGGNIVIYTNNGDTLPIVSLSGGERI
ALSIALRLAIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVPQILVVTHDEE
VVQAADYVIRVEKRGNKSFVREET
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgacaaaattactttgactaattttttaagtcatgaacacagtgaaatacac
tttctaggcgaaataaatgtaatagtgggacaaaatggagcaggtaagagttctataata
gatggcatagtattcagcttgtttagaacccatagtagaggaaataacgacaacttaata
agaaaaggttcaaataaggcgagcgttaccttacatctttctaatgaaaaagataaaata
gaaataataagggatataagaagcactacagaagataggttaatacggaatcaaatacca
gttgcacgtagtgcaacggtagtctctaatgaaatagagaaaattctgggtattgataaa
gatattgccctatcaacaataatagttagacaaggagaattggataaaattttggagaat
ttacaagacattatggggaaaattctaaagttggaatcaatcgagaagcttattgatagc
agaggtccaatagtggaatttaagaagaatttggaaaacaagttaagagagttagacagg
atagaacaagactataatgattctaagaagaacttggaggagaagagaaatagagtgttg
gagttagaaaaagataggaaaaaactggaggatgagataaagaacttggaaaatcaaata
actgagttaaagaaacaattcgaagattatgagaagaaaagaaatcagtacttagagttg
accactatcttaaaggtaaaagaaactaaattaaatgaattaaacaagagtatagaagaa
ctaagaagacaaacggaaaacatggataagcttgaaaaggaggtaaacgaacttgacaat
ttaaagaattttagattaaaatttgaaaaatatgaagttttatcgagaagttatatagag
atatccaataatatacttaatttagaaaaggaaattgaggaatatgaaaaagctatcaaa
agaaagaaagaacttgagccacattatctaagatacaaggaattggagagaaaactggaa
gaattacagccaaaacatgaagaatatctcaaatcgaaatccaatttagactccaaacta
aatttaaaagaacgtttagagaaagacgcaagtgagttttctaaagatatagatagaatt
ggtaatcttgaacaaattatggaagagaaaagaaaaagacaacttgatcttcgagctcaa
ttaggtaaagttgaaagcctaatatctgagaaaaatgagataataaataatcttagtcaa
gttaagggggaaacttgtccggtatgtggaagacccctagatgaggaacacaaacaaaaa
atagtagaagaagcaaaaagttacatttcacgattagaattagataagaatgaactggaa
gaagaattaaagaaaaccactgatgaattaaataaaattgaaaaagaatatagaaaactc
tcaaataataaggcaaattacgataatgtaataaagcaacttagaaagttaaacgaggaa
atagagaatcttcataataggattgaagctttaaaggatatagaggaggaaattaagaaa
ataaatgtagaaataaaggacctaaaacagtattatgaagagtttatgagactatttaag
tatgacgagaaggaacttgaaagaaaaaaaaataggttagatgaaatgaacaagaaaaaa
gtagaaatcgaaaaagaaatgagggctctagaaaccgaattacaagggttagaccgtaaa
gagctggagaataaaatttcagatttagagaggaagaaaaaaatcttggatgaaatgaag
aagaaaagaggagtactagaagactatataggacaagttgagctactacaagaagatgtt
aagaaactaagggaaaaattaaatatcatacagtttgatgaaaataaatataatgaactt
aaaacgagtttagatgtccataatgccagtcttaaggagaaggaaaacagaaaaagtaga
gtggagggcgaattggatagtttaggtaaagacatagaggaaataagtaatcgaattaag
aattatgaattgcaactaaaagataaagaaaagataatcaatggtattaataagctggag
aaaattagagatgcattaggagaacgaaaattacagagttatataatcatggcaacaaaa
caattaattgaaaataatctaaatgatataatatcgaaatttgatctatctattaaaaac
gtagaaatggagataatgccaaaaactagtagaggaaagggcagtggtgggaatatagta
atatacactaataacggcgatactttgcccatagtatcgcttagtggaggtgagagaatt
gccttatctatagctttaaggttagcaatagctaaggcactgatgagtaatactaacttc
ttcattcttgacgagccaacaattcatttagatgatcaaagaaaagcgtacttaatagag
ataattagggcagcaaaggaaagtgtacctcagatattagtggtaacacatgacgaggag
gtagtccaggcagctgattatgttattcgtgttgaaaagagaggaaataaaagttttgtg
agggaggagacttga
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