KEGG   Saccharolobus islandicus L.D.8.5: LD85_0178
Entry
LD85_0178         CDS       T01158                                 
Name
(GenBank) RNA modification enzyme, MiaB family
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
sii  Saccharolobus islandicus L.D.8.5
Brite
KEGG Orthology (KO) [BR:sii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sii03016]
    LD85_0178
Enzymes [BR:sii01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     LD85_0178
Transfer RNA biogenesis [BR:sii03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    LD85_0178
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: ADB85978
UniProt: D2PEM2
LinkDB
Position
complement(152741..154006)
AA seq 421 aa
MKTIYVETYGCALNRADTYVMMTLLKSEGYNFVENPENADIIILNTCAVRLETEERMKQR
IKELNTLSKKLVVAGCMSSAEPATVLSIAPNASLIGPQSVERIIDVIKSEERKIVLEGDR
ALITPRTFDGKIAIIPVADGCAGNCSFCITKLARRKLRSYPLREIVNAARDAVKAGAKEI
ELTGQDTAAYGLDLGGSISLVDVVNKVTEIDGDFMIRIGMMTPEQAMRIIDNLIEVMRNP
KVYKFIHLPVQSGDDRVLKLMNRKYTIDEYKELVSEIRSKIPFANITTDIIIGHPGEDED
AFNNTLLLMKELRFERIHLAMYSIRPNTRSASMPQVPDSVKKKRIQIANKLYEDIALSIH
LEYVGSTSRVITTELGRKGSVVGRLMNYIPVVIRSENVELGKWYNVKITEASFYDLRGVF
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaaaaccatctacgttgagacatatggatgtgcattaaatagggcagatacttacgta
atgatgacgttgcttaaaagtgagggttataattttgtagaaaaccctgagaacgcagat
ataattatactcaatacttgcgcagtaaggttagaaactgaagagagaatgaaacaaaga
attaaggaattaaacacgttatcaaaaaaattagtggtagcaggatgtatgagtagtgca
gaaccagctacagtactttccatagctccaaatgcgtcattaataggtccacaatcagtt
gaaagaataatcgatgtaattaaatcagaggagcgtaaaattgtccttgagggcgataga
gcacttataactcctagaactttcgatggaaaaattgcaataattccagtagctgatgga
tgtgcaggaaattgcagcttctgcataactaaactagcaaggaggaaattgaggagctat
ccattaagggaaatagttaatgctgcgagagatgctgtaaaagctggtgctaaagaaata
gaattaactggtcaagatactgcagcttatgggttagatctaggaggatctataagttta
gttgatgtagtaaataaagtaacggaaattgatggagactttatgataagaattggcatg
atgacgccagaacaggctatgagaataatagataatttaatcgaagtcatgagaaaccct
aaggtgtataagtttatccatttaccagtccaaagtggagatgatagagtattaaagcta
atgaataggaaatatacaatagacgaatataaagagttggtaagtgaaataagaagtaaa
ataccattcgccaatataactactgatataattataggtcatcctggagaagatgaagat
gcatttaataataccctattgcttatgaaggaattaagatttgaaagaatacatttagca
atgtactccatcaggccaaatactagaagtgcatcaatgccccaagttccagatagtgta
aagaaaaagagaattcaaatagctaataaactatatgaggatatcgcgttatctatccat
ttagaatacgtgggaagtactagcagagttattacaacagaattaggtcgtaaaggatct
gtagtaggaagattgatgaattatattccagtcgtgatcaggtctgaaaatgtagaacta
ggaaagtggtataatgttaaaataactgaagcatcattttatgacttgcgtggagttttt
gcttaa

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