Saccharolobus islandicus L.D.8.5: LD85_1297
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Entry
LD85_1297 CDS
T01158
Name
(GenBank) 2'-5'RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sii
Saccharolobus islandicus L.D.8.5
Brite
KEGG Orthology (KO) [BR:
sii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sii03016
]
LD85_1297
Enzymes [BR:
sii01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LD85_1297
Transfer RNA biogenesis [BR:
sii03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LD85_1297
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
ADB86968
UniProt:
D2PJL5
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All DBs
Position
1131744..1132328
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AA seq
194 aa
AA seq
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MRLFIGIEVPQSPKLLEIFEIVKNTGADIKLVEPYNIHITLLFLGEVRDDRVEEVKDSMS
GLKFNKFKVTLKGLGAFPNLTRPRVVWVGIVEGQQQLRQIRSYILNELLKRKIRPEDDKD
FSPHLTIGRVKSYNSISNLINTINENMNVDIGTFEVNNVVLFKSTLTPKGPIYDKLFEVS
SIDRGGSTEDNKTH
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctttataggcatagaagtaccgcaatccccaaaactgcttgaaatattcgag
atagtaaaaaatacaggagccgacataaaattggtcgaaccatataacattcacattaca
ctattattcctaggcgaagttagagatgatagagtagaagaagtgaaagattcaatgagt
gggttaaaattcaataaatttaaagttacactaaaaggtttaggggcatttccaaattta
acaagaccaagagtagtttgggttggaatcgttgagggccaacaacagcttagacagatt
agatcttatatacttaacgagctattaaagcgaaaaattagaccagaagacgataaggat
ttctcaccacatttaacaataggcagggtaaaaagctacaactccattagcaacctcata
aatacgattaacgagaatatgaacgtggatattggaacctttgaagttaataatgttgtt
ctctttaaaagcacgttaactccaaaaggtccaatatatgataaactatttgaagtgagt
tcaattgatagaggaggaagtactgaagataataaaacccactga
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