Saccharolobus islandicus L.D.8.5: LD85_1425
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Entry
LD85_1425 CDS
T01158
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sii
Saccharolobus islandicus L.D.8.5
Brite
KEGG Orthology (KO) [BR:
sii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sii03032
]
LD85_1425
03400 DNA repair and recombination proteins [BR:
sii03400
]
LD85_1425
Enzymes [BR:
sii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LD85_1425
DNA replication proteins [BR:
sii03032
]
Prokaryotic type
DNA Topoisomerases
LD85_1425
DNA repair and recombination proteins [BR:
sii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LD85_1425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF6848
Motif
Other DBs
NCBI-ProteinID:
ADB87093
UniProt:
D2PJZ0
LinkDB
All DBs
Position
complement(1258631..1260664)
Genome browser
AA seq
677 aa
AA seq
DB search
MNLCNVNNYYLIIAEKSKAAKKIAEALSEKPILCRKYNVNYWIIKDHDNNKYVIVPAAGH
LFGLQGKSGFPVYDADWKPLWEIDKNSYYTKRYYQLISSLSKYALGFINACDYDIEGSVI
GYLIIKYLGDTKKAKRMKFSALTKSDILLAFRNVSTLDYDMINAGVARHKIDWLWGINVS
RALMISLQDFAKKRVILSAGRVQSPTLVQVVNSEIERNLFIPLPKFTVSVIVKIKDYSLN
IKINKEFEKLAEANEFLNRLINKTVKVTQVENKIRILERPPPFNLTDLQVEAGRIYGISP
YNVERIAEDLYLDGLISYPRTNSQKIPSTINIYNIIKGLENSSYRKLVNLVRKITGGKYI
VRQGVKDDPAHPAIHPTGESPKNLPNNKFKIYDLIARRFLASVSADAKLSNTIYTLKVAD
FPLEFSVSYTKIPERNWLDIYHFHNVREDNPILLSKGDEGIISDGKVNISLSKPTSRYTK
VSLLKWMESSDLGTEATRGRIIEILVKRRYLTSNGRYIVPTKLGFYIAELLNKFFPDIVD
VRMTADMENKLEMIKTGKILESEVIKENIEKLNKFIEEYKANKDRVGESLAKALGLIKIV
KCKFCDLEQYKDGLCKYHYEAKTKLLDAVRIWEERTKYDHKKILKRISSSKSTGKYVKDI
VTYMLNMNDESHANLKR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatgtaatgtaaacaactattaccttataattgcagaaaagtcaaaagcagct
aaaaaaattgctgaagctctttcagagaaacctattttatgtagaaaatacaacgttaac
tattggataataaaagatcatgataacaataaatatgttattgtccctgcggcaggacat
ctttttgggttacaagggaagagtggtttccctgtatatgatgccgactggaaaccttta
tgggagattgataagaatagttattacacaaaaaggtactatcaacttatctcgtctctt
agcaagtacgctttaggctttatcaatgcatgtgattacgacatagaaggttctgtaatt
ggctatttaataatcaaatatctgggtgatactaagaaggctaaacgaatgaaattttca
gcgctgactaaaagtgacatattattagcatttagaaatgtgtctacattagattacgat
atgataaacgctggagtagctaggcataaaattgactggttatggggaattaatgttagt
agagctcttatgatttctttacaagatttcgcaaagaaaagagtgatattaagtgcgggc
agggttcaaagcccaactctcgtccaagttgtcaactcggaaattgaaagaaacctattt
attccattacctaaattcactgtttcagttattgtaaaaattaaagattattcactgaat
attaagataaataaagaattcgaaaaacttgctgaagcaaacgaatttttgaatagatta
ataaataaaaccgtaaaagttacgcaagttgaaaataagattagaatattagaaagacct
cctccatttaatctcactgatctccaagtagaagctggcagaatatatggtatatctcca
tataacgtagaacgtatagcagaagatctttatttggacggattaataagttacccaaga
actaatagtcaaaaaataccttcaactattaatatttacaatataatcaaaggtttggag
aatagttcgtatagaaagctagttaatttagtgaggaaaattacaggagggaaatatata
gttaggcaaggcgttaaggacgaccccgcacatcccgcaattcaccctactggcgaatct
cctaaaaatttacctaataacaaattcaagatatatgacctaatagcaagaagatttttg
gcttcagtatctgccgatgctaaactatcaaacactatttacaccttgaaagtggctgat
tttcccttagagttctcagtctcatatacaaaaataccagagagaaattggctagatata
tatcactttcataatgtaagagaagataatccaatacttctctcaaaaggtgatgagggt
ataatttcagatggaaaagtaaatattagtttaagtaaacccacttctagatatacaaag
gtttcattacttaaatggatggaatcttctgacttaggtacagaggctactagaggaaga
ataattgagatcctagtgaagaggagatatttgactagtaacgggcgctatatagtcccg
acaaaattaggtttctatattgctgagctattaaacaaatttttcccggatatagttgat
gttagaatgactgcagatatggaaaataaattagaaatgataaagactggcaaaatttta
gaaagcgaggttattaaagaaaatatagaaaaattaaataaatttatagaggaatataag
gcaaataaagatagagtaggagagtccttagctaaagctttaggcctcataaaaattgta
aagtgtaaattttgtgatctggagcagtataaggatggattatgtaaatatcactatgaa
gccaaaactaagcttttagatgctgtgagaatttgggaggaaaggacaaaatacgatcat
aaaaagattttaaagagaatcagtagtagtaaatcaacgggtaaatacgtaaaagatata
gtaacttacatgcttaacatgaatgatgaaagtcatgccaatctgaaaagatga
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