Saccharolobus islandicus L.D.8.5: LD85_1569
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Entry
LD85_1569 CDS
T01158
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sii
Saccharolobus islandicus L.D.8.5
Pathway
sii03022
Basal transcription factors
sii03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sii00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LD85_1569
09124 Replication and repair
03420 Nucleotide excision repair
LD85_1569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sii03021
]
LD85_1569
03036 Chromosome and associated proteins [BR:
sii03036
]
LD85_1569
03400 DNA repair and recombination proteins [BR:
sii03400
]
LD85_1569
Enzymes [BR:
sii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LD85_1569
Transcription machinery [BR:
sii03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LD85_1569
Chromosome and associated proteins [BR:
sii03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LD85_1569
DNA repair and recombination proteins [BR:
sii03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LD85_1569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPD_arch
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_22
nSTAND3
AAA_16
GvpD_P-loop
AAA_19
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
ADB87236
UniProt:
D2PC16
LinkDB
All DBs
Position
1377191..1378813
Genome browser
AA seq
540 aa
AA seq
DB search
MEVVKLQLRHWQAEKLNDAINALRQGKTLLLNAKPGLGKTVFVEVLGMQLDKKVLIFTRT
HSQLDSVYKNAKLLGLKMGFLVGKSASCIYAQGDEEPDEINCSKCTLKDKIKAIEDREPS
KLLEEFKEATDYCPYYSLKVNLKDKDVIAMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIV
IDEAHNLLEADKWFARKISRKTLEKALKEIEIVEKLSKVNAGRVREYINSLINYMSKLVR
DGRCHELSLMPLPNKETNDELVVITRAYLNIDEGPVKKSGLKALLKFIETEGELYNCNGS
LVKVPSDINELIEDALNVKTYKILMSGTLPESLTLTNSYKIIVNEGYGRGEYYYCPNVTS
ELRRRISNIPLYAMLLKRIYESSSKSVLSFFPSYEMLDRVRDKLSGIPVIEENRRTKHEE
VLELMKTGKYLVMLVMRAKESEGVEFRDKENLFESLVLAGLPYPNVSDDMVKKRIERLSK
LTGRNKDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYKEYFPDLGLKEKEIKLFV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgttaaattgcagttaaggcactggcaggcggagaaattaaacgatgctata
aacgcgttaagacaaggtaagactttattacttaatgcaaagcctggcttaggtaagacg
gtattcgtagaagttttgggcatgcaacttgacaaaaaagttctgatattcactagaact
cacagccagttggacagtgtttacaagaacgccaaacttttaggcttaaaaatgggcttt
ctggtcggtaagtccgcttcatgcatttacgcccagggtgatgaggaaccagacgaaata
aactgcagtaagtgtacgcttaaggataaaataaaggcgatagaggatagggaaccttcg
aagctccttgaggagtttaaggaggctacggactactgcccctattattcactgaaagta
aaccttaaggataaggacgtaatagcgatgacctatccgtatctattccagaaacctata
aggaattcggtgttctgtaataaggatgattgtctgaaactcgaagactatttgatcgtc
atagatgaagcacataacctactcgaagccgataaatggtttgcaaggaaaataagccgt
aaaacgcttgagaaggcattaaaagagatagagatagttgagaagcttagtaaggttaat
gcggggagggtgagagagtacattaactctctcattaactatatgagtaaactggtcaga
gacggaaggtgtcatgagttatcattaatgccgttaccaaataaggagacaaacgatgag
ttggtagtgataacgagggcgtatttgaatatagatgaaggccctgtaaagaagtccggt
ctaaaagcgttactaaagtttatcgagacggaaggagagctatataactgtaacgggagt
ctagttaaagtaccttcagacattaacgaattaattgaagatgcactcaacgttaaaacc
tataagatcctaatgagcggtacattacccgaatctctaacacttacaaattcctataaa
attatagtaaatgagggttacgggagaggagagtattattactgtccaaacgtaacttcg
gaactccgtaggaggatctctaacatccctctctacgccatgttactgaagaggatttat
gaaagtagtagtaagagtgtacttagtttctttcctagctacgaaatgctggatagagtt
agagataaactctcagggattcccgttattgaggagaataggagaacaaagcatgaggag
gttttggagctaatgaagaccggtaaatatttagtaatgttggtaatgcgtgctaaggag
agtgagggggtagaatttagagataaggagaatctatttgaaagtttggtgttggcgggg
ttaccttatcctaacgtttcggatgatatggtcaaaaagaggatagagaggttaagcaaa
ttaactggtagaaacaaggactcaataatacatgacttaactgcaatagtgatcaaacag
acaataggtagagcgtttcgtgaccctaatgactacgttaagatttacctttgtgattca
aggtataaggagtactttccggatttaggattgaaggaaaaagagattaagctttttgtt
tga
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