Saccharolobus islandicus L.D.8.5: LD85_1924
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Entry
LD85_1924 CDS
T01158
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sii
Saccharolobus islandicus L.D.8.5
Brite
KEGG Orthology (KO) [BR:
sii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sii03016
]
LD85_1924
Enzymes [BR:
sii01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
LD85_1924
Transfer RNA biogenesis [BR:
sii03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
LD85_1924
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
ADB87580
UniProt:
D2PD10
LinkDB
All DBs
Position
1665851..1666399
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AA seq
182 aa
AA seq
DB search
MVKALLVGSKVLIPNVDESRYIYSNGFYGKAIGISKPKDPKDIIRPLELSLIESVYLAKK
GLIKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYT
LGPGLEHAPYVVIAVDIDEEITPHELLSFGRVSHSTRKRLVLALVDRKSESVRYIMFKWV
KM
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagccttattggtgggatctaaggtattaatcccaaatgtagatgaatcaaga
tacatttattcaaacggtttctatggaaaggcaataggaatttctaagccgaaggaccct
aaagatataattagacctctagaattatcattaattgaaagcgtctatctagccaaaaag
ggtttaattaaagttatcgataaaaatggtgaagttcttgaatatgagaaattatatgaa
tatagttctaaaataataaataaatttgatatcatgtacagagtttacgaagacctgagg
gaaaaaggattcatagttagatctggagtaaagtatggagcagattttgcagtatatacg
ttaggacctggattagaacatgcaccttatgtggttattgcagtggatattgacgaagaa
attactcctcatgagttattgagttttgggagagtctcccacagcacaaggaaaagatta
gtattggctctagtagatcgcaaaagtgaaagtgtaagatacataatgtttaaatgggtc
aaaatgtaa
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