Saccharolobus islandicus L.D.8.5: LD85_2132
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Entry
LD85_2132 CDS
T01158
Name
(GenBank) conserved hypothetical protein
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
sii
Saccharolobus islandicus L.D.8.5
Pathway
sii03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sii00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LD85_2132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sii03021
]
LD85_2132
Enzymes [BR:
sii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LD85_2132
Transcription machinery [BR:
sii03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LD85_2132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
Filamin
Motif
Other DBs
NCBI-ProteinID:
ADB87785
UniProt:
D2PDL5
LinkDB
All DBs
Position
1848096..1851491
Genome browser
AA seq
1131 aa
AA seq
DB search
MNELSSNLSIDEKWKVIEAYFKSKGLVRQHLDSYNDFVRNKLQEIIDEQGEIPTEIPGLK
VRLGKIRIGKPRVRESDRGEREISPMEARLRNLTYAAPLWLTMIPVENNIEAEPEEVYIG
DLPIMLKSAIDPISQYTLDKLIEIGEDPKDPGGYFIVNGSERVIVTQEDLAPNRVLVDTG
KTGSNITHTAKIISSTAGYRVPVTIERLKDGTFHVSFPAVPGKIPFVILMRALGILTDRD
IVYAVSLDPEIQNELFPSLEQASSIANVDDALDFIGSRVAIGQKRENRIEKAQQIIDKYF
LPHLGTSADDRRKKAYYLAYAISKVIELYLGRREPDDKDHYANKRLRLAGDLFASLFRVA
FKAFVKDLTYQLEKSKVRGRKLALKALVRPDIVTERIRHALATGNWVGGRTGVSQLLDRT
NWLSMLSHLRRVISSLARGQPNFEARDLHGTQWGRMCPFETPEGPNSGLVKNLALMAQIA
VGINERIVEKTLYEMGVVPVEEVIRRVTEGGEDQNEYLKWSKVILNGRLVGYYRDGEELA
KKIRERRRNGEISDEVNVGHIVTDFINEVHVNCDSGRVRRPLIIVSNGNPLVTREDIEKL
DSGSITFDDLVRQGKIEYLDAEEEENGYVALEPSDLTPEHTHLEIWSPAILGITASIIPY
PEHNQSPRNTYQSAMAKQALGLYAANYQLRTDTRAHLLHYPQRPLVQTRALDIIGYTNRP
AGNNAILAVISFTGYNMEDSIIMNRSSVERGMYRSTFFRLYSTEEVKYPGGQEDKIVMPE
PGVRGYKGKEYYRLLEDNGVVSPEVEVKGGDVLIGKVSPPRFLQEFKELSPEQAKRDTSI
VTRHGEMGIVDLVLITETAEGNKLVKVRVRDLRVPSIGDKFASRHGQKGVIGMLIPQVDM
PYTVKGVVPDIILNPHALPSRMTLGQIMEGIAGKYAALSGNIVDATPFYKTPIEQLQNEI
LKYGYLPDATEVTYDGRSGQKIKSRIYFGVVYYQKLHHMVADKIHARARGPVQILTRQPT
EGRAREGGLRFGEMERDCLIGFGTAMLLKDRLLDNSDRTTIYVCDQCGYIGWYDKNKNKY
ICPIHGDKSNLFPVTVSYAFKLLIQELMSMIISPRLILEDRVGLSGGKGNG
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgagttgtcatctaatttaagcattgatgaaaaatggaaagttatcgaagcctac
tttaaatccaagggcttagttaggcaacatctggattcatacaatgactttgttagaaac
aagcttcaagagatcattgatgagcaaggagaaataccgacagaaattccaggtttgaaa
gttagattaggcaagataagaataggaaaaccaagagttagggaatcagataggggagaa
agggagatcagtccaatggaggctagattaaggaacttgacttatgctgctccactatgg
cttacaatgattccagttgaaaacaatattgaagcagaaccagaggaggtttatatagga
gacttacctataatgcttaaatcagcaatagatccaatatcacagtatactctagataag
ctaattgagataggtgaggatcctaaagaccctggaggttacttcatagtaaatgggtcc
gaaagggttatagtaactcaagaagatttagctccaaatagagttcttgtagatacagga
aagacgggatcaaatatcacgcatacagcgaaaattatctcgagtaccgcaggctacaga
gtacctgttacgatagaaagactaaaagatggcacatttcacgtatcatttccagcagtt
ccaggtaaaattccgtttgttattctaatgagagcacttggtatattaactgacagggac
atagtatacgcagtatcattagatcctgagattcagaacgaattatttccctctttagaa
caagcaagttctatagctaatgttgatgatgcgctagattttataggtagtagagtagca
ataggtcaaaagagagagaataggatagaaaaagcgcaacaaataattgataaatacttc
ctacctcatttaggaacttcggcagacgatagaagaaagaaagcatattatttagcttat
gctatatcaaaagttattgaactatatctaggtagaagggaacctgatgataaagatcat
tacgctaataaaagattaagattagccggagatttattcgcgtcattatttagagtagct
ttcaaagctttcgtaaaagatttaacgtaccaattagaaaaatctaaggtaagaggtagg
aagctagctttaaaggcattagttagaccagatatcgtaacagaaagaataaggcacgca
ttagctactgggaactgggttgggggaagaactggagttagtcaattacttgatagaact
aactggctttctatgttaagccatctgaggagagtaatatcctcattagcaaggggtcaa
cctaatttcgaggctagagacttacatggtacgcaatggggtaggatgtgtccctttgaa
acaccagaaggtccaaatagtggactagttaagaatttagcgttaatggctcaaattgca
gtaggaataaatgagaggattgtggaaaaaacactatacgaaatgggagtagttccggtg
gaggaggttataagaagagtaacggaaggcggagaggatcagaatgaatatctaaaatgg
tctaaagttatacttaacggaagattagtaggctattatcgagatggggaagaattagcc
aagaagatcagggaaagaaggagaaatggagaaattagcgatgaggtaaatgtaggtcat
atagttacagatttcattaatgaagttcatgtaaattgtgattctggaagagttagaagg
ccacttataattgtttctaacggtaacccgttggtaactagagaagatattgaaaagtta
gactctggttctattacctttgacgatcttgttagacaagggaagatagagtatctagat
gcggaagaagaggagaacggttatgttgctttagaacctagtgacttaactccagagcat
actcatttagagatatggtctccagctattttgggcataacagcgtctataataccttac
ccagagcataatcaatctcctagaaatacatatcagtcagctatggcgaaacaagcttta
ggtctatatgcagcgaattatcagttacgtacggatacaagagcgcatttactccattac
ccacaaagacctttagttcaaactagggcattagatattataggctatacgaacagacca
gccggaaataacgctatcctagctgtaatatcatttactggatacaatatggaagattcg
ataattatgaatagatcctccgttgagagaggaatgtataggtctacattctttagactt
tactcaacggaggaggtaaaatatcctggaggtcaagaagacaaaatagtaatgccggaa
ccaggtgttagaggatataaaggcaaagaatactatagacttctagaggacaacggagta
gtctcacctgaggtcgaagtgaaaggaggagatgtattgataggtaaagttagtcctccg
agattcttacaagaatttaaagaattatctccagagcaagctaagcgtgatacctcaata
gttactagacatggtgaaatgggtatcgtagatttagttttaattactgaaactgcggag
ggcaataagctagttaaggtaagagtaagagatcttagagtaccttcaataggtgataaa
ttcgccagtagacatggacaaaaaggtgttattggtatgcttataccacaggttgatatg
ccatatactgttaaaggtgtagtgcctgatataatattaaatcctcacgcattgccatct
agaatgacattaggccaaattatggaaggaatagctggtaaatatgccgcattatctggg
aatattgtagatgctacgcctttctacaagacacctatagaacaattacaaaatgagatt
ttgaaatatgggtatttaccagacgctaccgaagtaacgtatgatggtcgtagtggacag
aaaattaaatctagaatatactttggagtagtgtactatcagaaattgcatcacatggta
gcagataagattcacgccagagctaggggtccagtccaaattttaacaagacagccaact
gaaggaagagcaagagagggtggtttgagatttggagaaatggaaagagattgtttaatt
ggttttggtactgcaatgctccttaaggataggttattagataactctgataggacaaca
atttacgtttgcgatcaatgcggttatataggttggtacgataagaataagaataaatat
atatgtccaatacatggtgataagagtaacctgttcccagttactgtatcttatgcattt
aagcttttaattcaagaattaatgagtatgattatctcacctagattaattttagaggat
agggttggattgagtgggggtaaaggaaatgggtga
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