Saccharolobus islandicus L.D.8.5: LD85_2219
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Entry
LD85_2219 CDS
T01158
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sii
Saccharolobus islandicus L.D.8.5
Pathway
sii04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
LD85_2219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sii03019
]
LD85_2219
03009 Ribosome biogenesis [BR:
sii03009
]
LD85_2219
04131 Membrane trafficking [BR:
sii04131
]
LD85_2219
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sii04147
]
LD85_2219
Messenger RNA biogenesis [BR:
sii03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
LD85_2219
Ribosome biogenesis [BR:
sii03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
LD85_2219
Membrane trafficking [BR:
sii04131
]
SNARE
SNARE associated proteins
Others
LD85_2219
Autophagy
Aggrephagy
Other aggrephagy associated proteins
LD85_2219
Exosome [BR:
sii04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LD85_2219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_22
TIP49
AAA_33
AAA_14
IstB_IS21
AAA_28
nSTAND3
Mg_chelatase
Vps4_C
AAA_18
RNA_helicase
ABC_tran
ATPase_2
AAA_24
Parvo_NS1
Sigma54_activat
NPHP3_N
AAA_3
AAA_17
AAA_lid_PRS2_C
TsaE
AAA_7
ATP-synt_ab
NACHT
Zeta_toxin
NB-ARC
DUF815
AAA_25
Bac_DnaA
PhoH
ATPase
SPT16
Motif
Other DBs
NCBI-ProteinID:
ADB87866
UniProt:
D2PE33
LinkDB
All DBs
Position
complement(1917066..1919375)
Genome browser
AA seq
769 aa
AA seq
DB search
MSASSGEEQKPQRKELILRVMEARQKDVGRGKVRIDIDLLSQIDVSPGDVVEIEGTRKTA
ALAWPLSPEDTTTGEKDIIRMDGITRKNAGVSIGDKVIVRKAVVKPASTVKLAPSNFSIT
VDPGFISYVKKRLKEFPLVEGDTVLIPVLGQAIPFTVVQVKPAGIVLVNDDTIISISDKP
VEPSRYPRVTYEDIGGMKNIIEKVRELVELPLRHPELFKRLGIEPPKGILLYGPPGVGKT
LLAKAIANETDAYFTSINGPEIMSKFYGESEQRLREIFEDAKKHAPAIIFVDEIDAIAPK
RDEVIGEVERRVVAQLLTLMDGLENRGNVIVIAATNRPSAVDPALRRPGRFDREIEIPLP
DKQGRLEILQIHTRNMPLSKDVDLEKLADMTHGYTGADLSALVREAAMNSLRRYLPKIDL
NQDKIPPEILESMEVKMEDFINAFKEIVPSGLREIYIEVPEVKWTDIGGLEEIKEELKEV
VEYPLKYSELYQNSGIEPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWV
GESEKAVREIFRKARMYAPAVIFFDEIDSIAPIRGISYDSGVTERIVNQLLAEMDGIEKL
ENVVVIAATNRPDILDPALLRPGRFEKLIYVPPPDKRARIEILKVHTRNIVLGEDISLED
VAEKTEGYTGADLAALVREATMRAIRESMKICIEKTNESCKSTDTECKDKTMKECMKVNG
VKVSLRHFEEAMRKVKPSVTQDMLQFYQNWVEKARQQLPKTTVKPSTYA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctagttctggtgaggaacagaaaccgcaaagaaaggagttaatacttagagta
atggaagctagacagaaagatgtcggaagaggaaaagtgcgaattgatattgatttacta
tcgcaaattgatgtaagcccaggtgacgttgttgaaattgaaggaaccagaaagactgct
gcacttgcatggcctttatcgcctgaggatacaacaactggagaaaaggatataataaga
atggatggaataaccaggaaaaacgctggagtctcaattggagataaggttatagtaaga
aaagcagttgtaaagccagctagcacagtaaaattagcaccatctaacttctcaattact
gtagacccagggttcattagttatgttaagaaacgattaaaagaattccccctagttgaa
ggagatacggtattgattcctgtcctagggcaagccataccgtttactgtagtccaagtc
aaaccagcaggtatagttctagtgaatgacgatacgataataagcatatctgataagcca
gtagaaccttccagatatcctagagtcacatatgaggatataggtggaatgaaaaatatt
atagaaaaagtcagagagttagttgaattgcctttaagacatccagaactatttaagaga
ttaggaatagaaccacctaagggtatattattatatggtcctcctggagtgggaaagacg
ttactagcgaaagcaatagctaatgaaactgatgcatactttacttcaattaatggaccg
gaaataatgagcaaattctacggagagagtgagcaaagattaagggaaatatttgaagac
gctaaaaaacatgctcctgcaattattttcgtagatgaaatagacgcaatagcaccgaaa
agagacgaagtgataggagaagtagaaagaagagttgtcgcacagttactcactctaatg
gatggtcttgaaaatagaggaaacgtaatagtaatagctgcaaccaatagaccaagtgct
gttgatccagccctgagaaggccagggagatttgatagagagatagaaataccgttacca
gataaacaaggaagattggaaatattacaaatccatacaaggaatatgcctttatctaaa
gatgttgacctagagaagcttgcagatatgacacatggatatactggtgctgacttatct
gcattagtaagagaagctgcaatgaattccttaagaagatacttgccaaagatagatttg
aatcaagataagatacctccagaaatattagagtctatggaagttaagatggaagatttc
ataaacgcattcaaagaaatagtaccaagtggcttaagagaaatttacatagaagttcca
gaggttaaatggacagatataggtggcctcgaagaaataaaagaggagttaaaagaagta
gttgaatatcctctgaaatactcggagctataccaaaattctggtatagaaccacctaag
ggtatattattatttggtccaccaggaactggaaagacgatgcttgcaaaggctgttgca
actgaaagcggagcaaacttcatagcagtgagaggaccagaaatattatccaaatgggtg
ggtgaaagtgaaaaagcagttagggaaatatttagaaaagctagaatgtacgcgccggct
gtaatattctttgacgaaatagattcaatagctccaataagaggaatctcttacgattct
ggagtaacggagagaatagtaaatcaactattagcggaaatggatggaattgaaaaatta
gaaaacgtagtagtaatagctgcaaccaatagaccagatatcttagatccagcactatta
agaccaggaaggtttgagaaattaatttacgtacctccaccagacaagagagcaagaata
gaaatattaaaggttcatactaggaacatagtgttaggggaggacatcagcttagaggat
gtagctgaaaagactgaaggttataccggagctgatttagctgcactggtaagagaagct
acaatgagagctataagggagagtatgaaaatatgtatagagaaaaccaacgagagttgt
aaatccactgacactgagtgcaaagataaaactatgaaagagtgtatgaaggttaacggg
gttaaggtttccttgagacatttcgaagaagctatgaggaaagttaagccatcagttacg
caagatatgctgcaattctatcaaaattgggtagaaaaagctaggcagcaattgcccaaa
actaccgttaaaccaagtacatatgcgtga
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