Scardovia inopinata: SCIP_0006
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Entry
SCIP_0006 CDS
T03977
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sij03032
]
SCIP_0006
03400 DNA repair and recombination proteins [BR:
sij03400
]
SCIP_0006
Enzymes [BR:
sij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCIP_0006
DNA replication proteins [BR:
sij03032
]
Prokaryotic type
DNA Topoisomerases
SCIP_0006
DNA repair and recombination proteins [BR:
sij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCIP_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
LAMB1
Atrophin-1
Motif
Other DBs
NCBI-ProteinID:
BAR06073
LinkDB
All DBs
Position
7548..10337
Genome browser
AA seq
929 aa
AA seq
DB search
MADDKNITSENSDAQDSQNNSFDQAHETDDSLEPLSPQATAEDFGLLKGTRIKSMDLQQE
MRESYLAYALSVIVERALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYNKCSRVVGDVMGK
YHPHGDAAIYDTLVRMAQPWSMRYLLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMELVR
DIDKDTVDFVPNYDGKTQEPTVLPSRFPNLLVNGSAGIAVGMATNIPSHNMREIAEGVHW
ALNHPEASREELLNNLIAIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIN
GRLCLVVTELPYQVNPDRLASSIKEAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVP
KVVLNNLYKHTQLQQTFGANMLALVDGVPRTLSLDAFIRHWINHQLQVVERRTRYLKREA
EERDHILQGYLKALDMIEEVIALIRRSPDVEQARNGLMDLLDVDQIQADAILAMQLRRLA
ALERQKIIDEHEELLRRIEDYNDILAKPDRQRKIVGDEMDEIVDKYGDDRRTKILPFSGE
MNVEDLIAEENVVVTVTHSGYIKRTKADEYRAQHRGGKGIKGTRLREDDVVDHFFLTSTH
NWLLFFTNQGRVYRIKGYEVPEGSRDSKGQHVANLLQLGPDEKIQQVLSIKDYQTASYLV
LATRSGKIKKTRLDEYDSARQGGLIAVRLREIEGAFRTDKEGNQVPLVDELIGAALCNDD
DEIIVVSQKGMSVKFSADDQTLRPMGRQTAGVQAMKFRGKPGDDLLLSMDVVPQGTDSDL
LVVTNEGFAKRTALSEYRLQGRNGYGVKAINLVEGRGNLIGAIVVAEDDQVMAIMKSGKV
IRSDVSEIKRTGRNTQGVTLAKPDKGDEIISVARNAETEDQDEPSGSESGSENSRSLNSD
GSNGSDDGILKSQEPVEQVENKAGESSAE
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgataagaacatcacttctgagaactcggacgctcaggattcacagaataac
tcttttgatcaggcccatgagacagatgattccttggaaccgctgagccctcaggccacg
gctgaagattttggactcttgaagggaaccagaattaagtctatggatctgcagcaggag
atgcgcgaatcttacttggcttatgctctctcggttattgtggagcgggccctgcctgat
gtccgggatgggatgaagccggttcaccgccgggtaatttatgccatgtacgatggggga
tacaggcctgacaggggttacaacaaatgctcccgcgtcgtcggcgatgtaatgggcaag
tatcatcctcacggcgatgccgctatttatgacactcttgttcgtatggcccagccctgg
tccatgcgctacctgctggtagacggtcagggtaatttcggatctcctggtgatgatccg
gctgcggccatgcgttatacagaatgtcgtatggccccattggctatggaactggtcagg
gatattgataaagatactgtcgattttgttcctaactatgatggaaaaacccaggaacca
acagtgttgcccagccgtttccctaatcttttggtcaacgggtctgctggaattgctgta
ggtatggctaccaatattccttctcataacatgagagagatagccgaaggggtgcattgg
gccctcaaccatcctgaagccagcagggaagagctgctgaataatctgatagcaattatt
aaaggacctgattttccaaccggagcaaccattctaggtcataagggaatcgaacaggct
taccggacaggccggggactgattaccatgcgggccgtggtcaacactgaagaaatcaat
ggccgcctctgcctggttgtaacagaacttccgtatcaggtcaatcctgaccgcctggct
tcttccattaaggaagctgttcgtgacggcaagattcagggcattgctgacatgagagac
gaaacgtcaggtcggacaggccagcgcttggttttggttctcaagcgtgatgctgttcct
aaagtggtcctcaacaatctgtataagcatacccaactccagcaaacttttggggctaat
atgctggctctggttgatggcgttcccagaacgctcagcctcgatgcctttattcgtcac
tggatcaatcaccagcttcaggttgtggaaaggcgaacccggtatttgaagcgagaggct
gaagagcgtgatcacatccttcagggctatctgaaggcactggatatgattgaagaggtc
atcgctttgattcgccgctcacctgatgtggaacaagccagaaacggcctgatggacctg
ctagatgtcgatcaaattcaggccgatgccattctggccatgcagttgcgtcgtctggct
gctctggaaaggcagaagatcattgatgagcacgaagaactcctgcgcagaattgaagat
tacaatgatattttagccaagcccgaccggcagagaaaaattgtgggcgatgagatggat
gagatcgtcgataaatatggggatgatcgcaggactaaaatccttcccttctctggcgaa
atgaatgtggaagatctgattgcggaagaaaacgttgtggtaacagtgacacattctggc
tatattaagcggactaaagcagatgaataccgtgcgcagcaccggggaggcaagggtatt
aaaggaacccgcctgcgcgaggatgatgtggttgatcatttcttcctgactagtactcac
aactggcttcttttcttcactaaccagggccgggtatacagaatcaaagggtatgaggtt
ccagaaggatcccgcgattccaagggtcagcatgttgctaatcttctgcaactgggacca
gatgagaaaattcagcaagtcttgtccattaaggattatcagactgcttcctatctggtt
ttagctactaggtcaggaaagattaagaaaaccaggctggatgaatacgattctgccagg
caaggcggccttattgctgttcgtttgcgggagattgaaggcgctttccgtacagataag
gaaggtaatcaggtaccactagttgatgagctgattggtgctgccctctgcaacgatgat
gatgaaattattgtggtctctcagaagggaatgagtgttaaattctccgctgatgatcag
acccttcgtcctatggggcgtcagaccgcaggtgttcaggctatgaagttccgtgggaag
ccgggagatgatctcctcctgagcatggatgtggttcctcaggggactgattctgatctt
ctcgtagtgaccaatgaagggttcgccaagcggacagccctgtctgaatataggcttcag
ggtcgcaatggctatggggtaaaagctattaatctggtagaaggtcgggggaatctgatt
ggtgccattgtggttgctgaagatgatcaagtcatggctattatgaaatccggtaaagta
atccgatccgatgtttctgaaatcaaacgtactggtcgcaatactcagggtgtgacctta
gctaagccggataagggtgatgaaattatctccgttgcacgcaacgctgaaacagaagat
caggatgaaccatcggggtctgaatcggggtctgagaactcaaggagtttaaacagcgat
ggttcaaacggtagtgatgatggtattctgaagtcacaggaaccggtagaacaggtagaa
aacaaggctggcgagagctcagctgagtag
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