Scardovia inopinata: SCIP_0100
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Entry
SCIP_0100 CDS
T03977
Name
(GenBank) putative transcription regulator
KO
K03710
GntR family transcriptional regulator
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sij03000
]
SCIP_0100
Transcription factors [BR:
sij03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SCIP_0100
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
UTRA
HTH_41
HrcA_DNA-bdg
Motif
Other DBs
NCBI-ProteinID:
BAR06167
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Position
complement(127060..127911)
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AA seq
283 aa
AA seq
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MKPKSNGALNSPSRIIDSDSLIENSIRPVSQNASGHRKLQSQRIAEDIGQQILKGILQDG
DRLDSELDLAHKHGVARGTMRNALDILKEKGLVVTKPGVGSFVSYHGHSMENPQGWAEAS
AQAGSPTVAEVISCTREPASEELQRAYGVENDVYRIVRRRIIKRNKTPYSAQKIIPVSIE
ISVLPVNRILDLIMEHGLLGDSISLTMQAAGMVPVSGVQDAHVGLAPEEYRQQLEASDKD
NFLIVSKASFNENEDLVEYVVSYLNPQHFSLHTEFRRDNDTIN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctaaaagtaatggagctttgaattcaccgagtagaatcattgattctgattca
cttatcgaaaattcgatccggccagtttcccagaatgcatctgggcaccgaaaattacaa
tcccagcgaattgcagaagacatagggcagcaaatactaaaaggaatactccaagatggc
gatcgtttggactctgaactcgatttagctcacaaacatggagttgctcgaggaactatg
cgcaatgcattggatatcctcaaagaaaaaggattggtcgttaccaagcccggagttgga
agctttgtttcataccacggtcatagcatggagaatccgcaaggttgggcagaagcaagc
gcacaggctggatctcctactgtggcagaagttatatcttgtacacgcgaacctgcgtcg
gaagagctgcaacgcgcatatggcgtcgaaaatgatgtctatcgcattgtccgaagaaga
ataatcaagagaaataagactccatattcagcacaaaagatcatccccgtttctattgag
atctctgttttaccagtaaacagaattcttgatctgatcatggaacatggattattagga
gattctatttcacttactatgcaagctgcaggaatggtcccagtgagtggagtacaggat
gcacatgttgggcttgctccagaagaatacagacaacagttggaagcaagcgataaagat
aattttcttattgttagtaaagcaagttttaatgaaaatgaggatcttgtcgaatacgtt
gtttcttacctcaaccctcagcatttttccctacacaccgaatttaggagagataatgac
accatcaattaa
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