Scardovia inopinata: SCIP_0229
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Entry
SCIP_0229 CDS
T03977
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sij
Scardovia inopinata
Pathway
sij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCIP_0229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sij03400
]
SCIP_0229
Enzymes [BR:
sij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCIP_0229
DNA repair and recombination proteins [BR:
sij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCIP_0229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Suc_Fer-like
HypA
Motif
Other DBs
NCBI-ProteinID:
BAR06296
LinkDB
All DBs
Position
283164..285476
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AA seq
770 aa
AA seq
DB search
MVILGEQMTLEGLAPRKRRSSAQQKVPAGSLPFAQVVIDVQAAHLGQTFDYLVEESQSDR
AQPGALVRVRFGGRLLNGIIWNRSDTSTAPRSSLRFLERVMGSSILVPAQMRQDISDIAD
FFGGTRANIIRLAVPPRVAHVDKEPRFGRSSARPGRQSGFSAGSRAGYPFSQETLQAYQN
QTERIRKLYQHSDALNRAWEQSAVNSLVWDCLPGVNTWADDLSWLIMKSLESDRPIVVEL
PDAAHIRQLHQRLQACGLKAYAQRSARGVWQGDYCILAGMMTPEERYRSYMALARSEVTC
VIGARAAMYAPVEGRAVFVVVDDCAYQNADGFTPYANARDVLRLRARNHQGTFIALGHVR
SPYSQWELEGRPTAIDCGKVLEVRGLPTETKRMTPWVRLFNRQELENLTDPTIGARVPHT
AVSIINNALKVGPVLLCVPHDGQSMTLICSSCHRQARCRRCAGPLKQSLTQGQAPRCLWC
GFAATEWTCPHCGGEKMRVIQVGALGTAQELRGLFPHTRIVTSTPHQPRGIVTQIEDRPQ
VVIATPGAEPQIISTGLTRMEHREGLRVQQTYQGPHHPSAACYQAVVILDTWTSLYASQL
DSRIDILTAWMRAASLCASHEDGGQVLLLGECEPAIAHSLMTWDSSFLSARETADRQETD
MPPAITVANVWGRREVIDDLLSEIGVESDGDWGFLPDGMPAVLGPISIPPPSTVKDRQLE
GSNDRVRAAVRVPVAKTRQLAQRLHLAAARHATSRLKGELKFQINPKSLS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggtcattttgggcgaacagatgacgctggaaggcctggccccgcgcaagcgcaggagt
tctgctcagcagaaggttcctgctgggagcctgccctttgctcaggtagtcatagatgtg
caggcagctcatctgggccagacttttgattatctggtggaagaatcccaatcagacagg
gctcagcccggcgctttagtgcgggtgcgttttggaggccggctgctcaacggaattatc
tggaatcgatctgatacaagtacagccccccgcagttctttacgctttctcgagcgggtt
atgggatcctccattcttgttccagctcagatgaggcaggatatcagtgatattgcagat
tttttcgggggtaccagggctaatattattcgcctggcggttcctccccgggtggctcat
gtagataaagagcccagattcggcaggtcgtcagccaggcctggcaggcagtctggtttt
tctgcaggttcccgggcgggttatccttttagtcaggaaactctgcaagcgtatcagaat
cagactgagcgcattcgtaaactgtatcagcacagtgatgccttgaatcgcgcctgggag
cagtctgcagtcaacagccttgtctgggattgcctgcccggagtcaatacctgggctgac
gacctgtcctggttgatcatgaaaagcctggagtcggaccggcccatcgtagtggaattg
cctgatgctgctcacatccgtcagcttcatcagcgtcttcaggcctgcgggcttaaggct
tatgcccagcgttctgctcgcggggtctggcagggagattactgtattctcgccggaatg
atgactccagaggaacgatatcgctcctacatggccttggccagatctgaagtaacctgt
gttattggggccagggctgccatgtacgctccggtagaaggccgggctgtttttgtggtt
gtggatgactgtgcttatcaaaatgcggatggttttaccccttatgccaatgcccgcgat
gttcttcggctaagggccaggaatcaccaaggaacatttattgccctgggacatgttcgc
agtccttacagtcagtgggagctagaaggcaggccgactgctatagactgtggaaaagtc
ctggaggtcaggggactgccaacagagacaaaaagaatgaccccctgggttcggcttttt
aataggcaggaattggaaaatctgaccgatcccaccattggggccagggtgccccatacg
gctgtttccatcattaataatgccctgaaagtgggtcctgttctgctttgcgtaccccat
gatggccagtctatgaccctaatctgttcttcctgccacagacaggcccgttgtcggcgc
tgcgctggccctcttaagcagtccctgactcaggggcaggccccccgctgtctctggtgc
ggatttgctgcaactgaatggacctgccctcattgtgggggagaaaaaatgagggttatt
caggttggggctttgggaacggctcaggagctgcgcggacttttcccccatacccgcatt
gtgacttcaactcctcatcagccgaggggaatagtgacccagattgaagaccgacctcag
gtggtcattgctactcctggcgccgagcctcagattatcagcaccggtctaacccgaatg
gagcatagggagggcctgagggtccagcagacctaccaggggcctcaccatccttctgcc
gcctgttatcaggctgtggtaattctggatacctggaccagcctctatgcttcacagcta
gattccaggattgacattctcaccgcctggatgagggccgcctccctgtgtgcttcccat
gaggatggggggcaggtacttttactaggagagtgcgaacctgcgattgctcattccctt
atgacgtgggattcttcctttttgtctgccagggaaacggctgaccgccaggaaactgat
atgccccctgccattactgtcgccaatgtgtggggccggcgggaagttattgatgacctg
ctttctgagattggtgtggaatcagacggcgactggggtttcctgccggatggtatgcct
gctgtcttggggccaatctctattccgcctccttccacggttaaagaccggcagttggag
ggaagcaatgaccgggttcgggcggcggttcgggtacctgttgccaagaccaggcagctg
gctcagcgtcttcacctggctgctgccaggcacgctacctcccggctcaagggggaacta
aaattccagattaatcctaaatctttgagctag
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