Scardovia inopinata: SCIP_0232
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Entry
SCIP_0232 CDS
T03977
Name
(GenBank) amylopullulanase
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
sij
Scardovia inopinata
Pathway
sij00500
Starch and sucrose metabolism
sij01100
Metabolic pathways
sij01110
Biosynthesis of secondary metabolites
Module
sij_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SCIP_0232
Enzymes [BR:
sij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
SCIP_0232
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUD
Alpha-amylase
Alpha-amylase_C
CBM_25
CBM_48
CBM26
GlgB_N
MG2
pulA_all-beta
DUF3459
CBM53
Big_13
NPCBM_assoc
Motif
Other DBs
NCBI-ProteinID:
BAR06299
LinkDB
All DBs
Position
288644..294088
Genome browser
AA seq
1814 aa
AA seq
DB search
MKKLKISKIVWSLLAAISMIIVSFVGIDSSAYATMPANTATASGTAATTNRNVTVIAFQQ
NWNSIAKECTDTYGPEGVGYVEISPPQETIKGAQWWTSYQPVSYKLDSKLGTEAELKSMI
ATCKAAGVGIIADAVINHMAGTGQAGTGVAGSTYSDGNFPAVPYTSSDFHTCTKNVSDYT
KADEVWNCRVTGLQDLNTASSSVQDKIAAYMKKLLDLGVAGFRVDAAKHMDPKDLSAIKV
KLAQKSGIAEDKIYWNQETLGNASEAAEIQPENYTSTGEVHEMNFAYDLKNAFNGNNGGL
AGLQNFSSKLLPSENASVFVSNWDSERNNSTLTYRNGSKYQLANAFMLAYGYGTPYINSG
YTFENSATGHDAGAPGATQTSIPDVSCTPKSGWLCVQRWTSIRGMVGFHNNVSGAVTNWW
SNGSDAIAFERAKTGYLAINNSSSDISRTFTTSLPAGEYCNVYAAGDCSSTVTVGADGSF
KATVPKHSALAIYTKALKSSWKGTQKSDPMDPDISQEDNKSSQKTDNTVTIYFKTDWKTP
YIHHQTADGWTDVPGEAMTKACDGYYSASVKLVDGSLEFLFNDGNGTWDHPNGADSGNYT
ISKQEDVTVANGKISASAPCSVTDKASTKLIVHYRPKSGDTAADQRGVYVWGTSKTGKTL
DGKNYAFNQASDSFGKVFSMNFDGAYKSLGVIVTTTDWNKDGQSDRTVDTSSGTGEIWVL
GGDETTYTEPPAQAGIKLTKLDVTIHYHRPDGNYDNWDVWKWADGIADGLPATFSSHDSF
GKIATYSLSSDSGVTGAKFIIRYGGDAWTGRESNGVDADGGRSIPWSAITITGKNTGKAE
VWIVSADTTVYTNPSVIDLSSKITHAEISGLNEITVTLNRTASADNLQGKISLDSKKIKS
YKVDGTKVIITTSDEIKANEAVKISITGYNDATAIAGSMVRTNAFDAKYSYSGNDLGATY
SQKSTTFKVWAPTAQSVKLNTYRSTVSDSGLDKSYNMTLSGRGVWTVTVKGDCKDTAYDF
TLTFPDGKVNQAADPYGRASTVNGGRSVVLSAKEMTPANWGKRMSAFSNPTDAVITEMSI
RDFSASSTSGVSQSKRGKYLGVVEKGTKNSKGQATGLDYLKESGTTHVQIMPTYDFNNVN
GEIGNNVAYNWGYDPMNYNVPEGSYSSNPATPSTRITEMKQMIQGLHKAGIRVIMDVVYN
HVYDANKHVFNQIVPGYYFRYDSSGNLVSNSGCGNDTASERSMVRKYIVDSVTYWAKNYN
LDGFRFDLMGLLDLQTMKAVRSALDKIDPSIMVVGEGWDMNTTMGKDKMSIQPNGYQLTT
NKSTIGFFNDSYRDAIKGSVFNAEAKGFVQGQFGNESLLANNFLGCQNQKGFAACTNGNA
NVKYSGPSQVVQYVEVHDNLTLYDKLKASMPKESDATITKRDELANSMVLLSQGTPEIQL
GQAFLRTKGGNDNSYNAGDSVNAIDWDRLSTYKASADYVKGLIALRKAVPALRQRSYASL
NAHSKVLAQSDGVLAFELSDSSGTYVVAFNANTSQKKLSGLKKSTYTVVSSGNTVDTKAV
AAIAKLVKTGKMDSREGQGSRFTEVNSDGTYILPALGTLVLRQGSLLKASSGKSDQDKDH
GKSSKPALKLSVHVIVAGGRLTVFISGLKAHTEYTLWLHSSPIRLTNVTTDSKGSASVTV
TIPASAPAGKHTIVVTDVVTDKNKTAPALASDSLKVKAPAKSAPSPSKNPSGKNTQSHGS
ADGKIAQHPAGDKNQNGVNRKGGKISAAPATTSPGTSRLSATGAGLGAVSSVFLLLLAAA
AGAVIIRRKADSKK
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaagataagcaagattgtgtggtcgttgcttgccgcgatttccatgatc
attgtcagctttgttggtatagactcatctgcctatgcaacaatgccggcaaacacggca
actgcatcaggaacagctgcaaccaccaaccgcaatgtaacggttatcgcttttcagcaa
aactggaattcgattgccaaggaatgtactgatacatatggccccgagggagtgggatat
gtagagatttctcctcctcaggaaactatcaagggtgctcaatggtggacctcctatcag
ccggtcagctataaacttgactccaagctagggaccgaggcagagctgaaaagcatgatt
gctacctgcaaggctgccggtgtaggaattattgctgatgctgtcatcaaccatatggca
gggacgggccaggcaggtaccggtgttgctgggagtacctattctgatggcaatttccct
gctgtcccctatacatcctccgatttccacacctgcactaagaatgtcagtgattatacc
aaggctgatgaggtatggaactgccgggtaactggtctgcaggatctgaacacagccagc
agctctgtccaggacaagattgcggcctatatgaagaagctcctagatctgggtgtggca
ggtttccgagttgatgcagccaaacacatggatcccaaggatttaagtgctattaaggtg
aaactggctcaaaagtccggcattgcggaagacaagatctattggaatcaggagaccctg
ggcaatgccagtgaggcagcagagattcagcctgagaactacaccagcactggtgaagtt
cacgagatgaattttgcttacgatctgaagaatgctttcaatgggaataacggcggtctg
gccggcctgcagaatttttccagcaagctgcttccctcagagaatgcttctgttttcgtt
tcaaactgggacagcgaacgcaacaacagcacactgacttatcgaaacgggtctaagtat
cagttggctaatgccttcatgctggcctatgggtacggcaccccttacatcaattctggc
tacacgtttgaaaactctgctacaggccatgacgccggtgctccaggcgccacccagacc
agcatccccgacgtttcttgcacgcctaaatcgggttggctctgtgttcagcgctggacg
tccatccgtggcatggtgggcttccataacaatgtcagtggggcggtgaccaactggtgg
tctaatggctcggatgccatcgcatttgagcgggcaaagaccggctaccttgccatcaat
aattcatccagcgacataagcaggacttttaccacctccctgcctgctggcgaatactgc
aacgtttacgctgcaggtgactgctcttctacggttactgtaggggctgacggcagcttc
aaggctactgttcctaagcattctgccttggctatctataccaaggctctcaagtcctcg
tggaaggggactcagaagtccgatcctatggatcctgatatctctcaggaagacaataag
tcttcccagaagaccgataacacggttaccatttacttcaagactgattggaagactcca
tatattcatcatcagaccgctgacggatggactgatgttcccggggaggcaatgaccaag
gcctgcgatggctactattcagcatcagtcaagctggtggatggaagtttggagttcctt
ttcaatgatggcaatggtacctgggaccatcccaacggggccgacagcgggaactacacg
atctccaagcaggaggatgttaccgttgccaacgggaaaatttctgcctcagctccctgc
tcagtaaccgacaaagcatcgaccaagctgattgtccattaccggccgaagtccggcgat
acagctgctgatcagcgtggagtctatgtgtggggaaccagcaagactgggaagaccctt
gatggaaagaattatgccttcaatcaggccagtgattccttcggcaaggtgttctccatg
aacttcgatggagcgtataagtccctgggtgtgattgtcaccaccaccgattggaacaag
gacggtcagtctgaccgcacggtcgacacgtccagcggaaccggagaaatctgggtcctg
ggaggcgatgaaacaacctatactgaacctcctgcccaggcaggaatcaagcttactaag
ctggatgtgaccattcactatcatcgtcccgatggcaattacgacaactgggatgtgtgg
aagtgggccgatggtattgctgacggcctgccggccaccttcagctcccatgattccttc
ggcaagattgccacctacagtctgagctcagacagcggagtaacgggagcgaaattcatc
atccgctatggcggggatgcctggactggccgtgagagcaatggcgtggatgctgatggc
ggcaggtctattccttggtcagctatcaccataaccgggaagaatacgggcaaggcagaa
gtctggattgtgtctgcagacactacggtatataccaaccctagtgtgatagacctatcc
agcaagattacccatgcggaaatcagcggtttgaatgagattactgtaaccctcaaccgc
acagcttctgctgacaatctacaagggaagatcagcctggactctaaaaagattaagtcc
tataaggtcgatggcaccaaggtcattatcaccactagtgatgaaatcaaggctaatgaa
gctgtgaagatttccattaccggctacaatgatgctactgccatcgccggttccatggtt
aggactaatgcttttgatgccaagtactcatacagtggcaacgatcttggcgctacttac
tctcagaagagcactaccttcaaggtatgggcaccgactgctcagtctgtcaagctcaat
acctacagatctaccgtatctgattctggcttggacaagtcctacaacatgaccctgtcc
ggtaggggagtgtggacagtaaccgtaaagggagactgcaaggatactgcctacgatttc
accctgaccttccccgacggaaaagtcaatcaggctgccgatccttatggacgggcttct
acagtcaacggaggccgttcagttgtgctttctgccaaggaaatgaccccggcgaattgg
ggcaagcgcatgtcagccttcagcaacccgaccgatgcggtgatcaccgagatgtccatc
cgagatttctctgcctcttctacttctggagtgtctcagtccaagcgaggcaagtatctg
ggcgttgttgagaaagggaccaagaattccaaggggcaggccacgggtctggattatctg
aaggagtccggcaccactcacgttcagattatgcctacttacgatttcaacaatgtcaac
ggagagattggcaacaatgtggcctataactggggctacgatcctatgaactacaatgtt
cctgaagggtcatattccagcaatccggccaccccatccacccgcatcactgagatgaag
cagatgattcagggcttgcacaaggccggaatcagggtcatcatggatgtggtttataac
catgtttatgatgccaacaagcatgttttcaatcagattgttcctggctattacttccgc
tatgacagcagcggaaacctggtcagcaactctggatgcggcaatgatacggcttcggag
agatctatggttcgtaagtacattgtggattcagtgacgtactgggccaagaattacaac
ctggatggcttccgctttgacctgatgggtctgcttgatctgcagaccatgaaggccgtc
cgttctgccctcgataagattgatccttccatcatggtcgttggtgaaggctgggatatg
aataccaccatgggcaaggacaagatgtccattcagcctaatggctaccagttgacgacg
aacaagtccacaattggtttcttcaatgattcctaccgcgatgccatcaagggcagcgtt
ttcaatgctgaagccaagggatttgttcagggacagtttgggaatgaaagcctgctggct
aataacttcttgggctgccagaatcagaaaggatttgctgcctgcactaacgggaatgcc
aacgtgaagtacagtggcccctctcaggtagtgcagtatgtggaggttcacgataatctg
accttatatgacaaattgaaggccagtatgcccaaggagagtgacgccaccattaccaag
cgtgatgagctggccaactccatggttctgctctctcagggcactcctgaaattcagctg
ggtcaggcttttctaagaactaagggcggcaatgacaacagctacaatgccggggattcg
gtcaacgctattgattgggatcggctcagtacctataaggcttctgctgattacgttaag
ggtttgattgccttgcgcaaggctgttcctgccctcaggcagaggagctatgcttctttg
aacgctcacagcaaggttttggctcaatctgacggagttctggcttttgagctgtccgat
tcttccggtacctatgtggtggctttcaatgccaacaccagccagaagaagctgtccggc
ctgaaaaagtccacctatacggtagtttcctctgggaacacagttgataccaaggctgtt
gccgccatcgccaaactggtgaagacaggaaagatggacagcagggagggacaaggctcc
cggttcacagaggtaaactctgatggaacctacattctgcctgccctgggaactctggtt
ctgcgccagggcagcctgctcaaggcttccagcggcaagtctgatcaggacaaggatcat
ggtaagagttccaagcctgccttgaagctcagtgtccatgtgattgttgccggcggtcgg
ctgacagtgttcatttctggtctgaaggcccataccgagtacacgctctggctgcactcg
tctccgatcaggctgactaatgtcaccacagacagcaaggggagtgcctctgtcacggtg
acaattcctgcttcggcaccagcagggaagcatactattgtggtgactgatgtggtgacc
gacaagaataagacggcaccggctcttgccagtgactccctgaaggtgaaagctccggct
aagtctgccccgtctccttcaaagaatccgtccggtaagaacactcagtctcatgggtca
gcagatgggaagattgcccagcatccggctggtgataaaaaccagaacggtgtgaaccgg
aagggaggcaagatttccgctgctcctgccacaacatctccaggcacttcccgcctgtca
gcaacaggcgctggcctgggggccgtcagctctgtcttcctcctcttgcttgctgccgca
gctggagcagtgattattcgcaggaaggctgacagcaaaaagtaa
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