Scardovia inopinata: SCIP_0314
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Entry
SCIP_0314 CDS
T03977
Name
(GenBank) conserved hypothetical protein
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sij03009
]
SCIP_0314
Enzymes [BR:
sij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SCIP_0314
Ribosome biogenesis [BR:
sij03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SCIP_0314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF1062
S4
Motif
Other DBs
NCBI-ProteinID:
BAR06381
LinkDB
All DBs
Position
398241..399176
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AA seq
311 aa
AA seq
DB search
MNKVTMVPEDLVGVRFDLAVSRMMGLSRSKAANLIDQGQISLIGRCGLKSEKLQSGDSIR
VSLTTSEKAPEPIDYDMGIVYEDGDLVVVDKPVGMAAHQSVGWTGSTVLGSLKARGVHIT
DYGPQGRQGIVSRLDVGTSGLMLVCKSQMAYKEMRRQFSQHEVKKTYYALAQGNLKEDKA
TVDAPIGRDSAADFRFTITPAGKPAITHWDVIERFGQATYISVNLETGRTHQIRVHMSSL
GHPLVGDSMYGANPVLAEQLGLSRQWLHSMKLDFRHPRTHCPVHLESTLPTDLATALETL
RLRTAKRDKQD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggtaaccatggtcccggaggatctggttggtgtccgctttgatcttgctgtt
tcccgaatgatgggtctgtcccgctcaaaggcggccaatctgattgatcaggggcagatt
tccctgatcggtcgctgcggcctgaagtctgagaagttgcagtcaggagattccattcgg
gttagtctgactacaagtgagaaggccccagaacccattgactacgacatgggaattgtc
tatgaagatggtgatctggttgtggtagacaaacctgtgggcatggcagcccaccagtcg
gtgggatggaccggatccaccgttttgggcagtttgaaagccaggggagtgcatattact
gattacggtccccagggccgacaggggattgtttcccgtctggatgtgggcaccagcggt
cttatgctagtttgtaagtcgcagatggcttataaagagatgaggcggcaattttcccag
catgaagttaaaaaaacctattatgccctggcccagggcaatctgaaagaggacaaggct
acggttgatgctccaattggcagggattcagctgctgactttcgctttactatcactcct
gcaggcaaaccggctatcactcattgggatgtgatagaacgtttcggtcaggctacgtat
atcagcgtcaatctggagactggacggactcatcagattcgggtccatatgtcttccttg
gggcatcctttggtaggagacagcatgtacggggctaatccggttctggctgagcagctg
ggcctgtcccggcagtggctgcactccatgaagttggatttccgccatccccgtactcac
tgcccggtccatctggaatccaccctgccaacagatttagctacagctttggagacactc
cgtctgaggacggcaaagagagataagcaggattag
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