Scardovia inopinata: SCIP_0319
Help
Entry
SCIP_0319 CDS
T03977
Name
(GenBank) putative ABC transporter permease component
KO
K02004
putative ABC transport system permease protein
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sij02000
]
SCIP_0319
Transporters [BR:
sij02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
SCIP_0319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
TFIIA
DUF7241
Motif
Other DBs
NCBI-ProteinID:
BAR06386
LinkDB
All DBs
Position
406529..409477
Genome browser
AA seq
982 aa
AA seq
DB search
MIKIGFREARAHFSRFIMSIVAICLGVAFIVGSFSFRNMLQDQMTSVFASSSEGDVYVRG
VKKSTDTSSSSSSSSSSSLSAASLAAGTNYNSIPSSLISDIKKVKGVKSAFALMTMTNAA
LVGKDGTAVGAGTTGITAVSMAKNATWRSVSFIKGTYPHGAGQVSLLKQTADAAGLKVGD
KTTFVYASGPKKVKISGIFTLTSVAQGTLYVGIDPQVVKQERVYTVLGSSASAASSSTSS
ASSTNAKPSSPAPSASAPSLPSGQGGNQRQIQEQRQAQAQAQAQARAHAQAQAKAQAQAR
AQEQARRKAYQEANAYISVITVYGTGSKGRPLTDSQQKALAKRVNAMLDAKSSNKGKTKA
AAITGDALRAEQKDGINSMMGFIQPMILIFAFIALFVGTFIIANTFSMIVRESMRRYALL
RSVGASPSQVFTTVIIQALVMGLVGSVLGIFLGWGMMSLISVGLSRSGSPLTGSSRPGLN
AIIIGLIVGLAVSLIGAALPARRAALAPPIQAMNETVNPQKSTRGRGWLGLAIFLLGVLF
WFLSLSLVAYDGPEGQGPTPLSWLNSFSPDAALGWGALFIILSVIVMTPSLVVPAQKILG
VIPQLLFPVSGKLASRNLDRSKRRTANTAAALFVGLAIVSCVGTLASTLTASTAGLIDEG
MTADFAIRSQTMTIPTDLDKKLAKTEGIRSVTKVTMIPRLKFNGKQINGFSMTAKDTLFK
DVYKPHMISGSAVSAISKDQLVVGKTIADDNKWSVGTVLTVKSPDATRKIKIGAITDSAT
YTNSIYLSSKVSDQLRKSYAGVTLALYVSAKPGTNLTSLEKKLKKQVKKYYVLTVMNKEE
LKSSIATLINNIMVIIYALLALSILIAIFGVVNTMALSVSERTREIGLLRAIGTSNGQVQ
GMIAIETVMISVLGTVEGIVTGLAAGIVIQQVYKDSGLGTLSIPFKQLLIFLILSVLIGL
LASLSPSRRALKVPVLNAVSDE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatcggatttcgcgaagccagagcgcacttctcccgcttcattatgtcaatc
gttgccatctgcctgggagttgcctttattgttggttccttcagtttccgcaatatgctt
caggaccagatgacctctgtttttgcctcctcatctgagggagatgtgtacgtcagagga
gttaagaaatcaacagacacatcatcctcatcttcttcatcttcttcttcctccttgtca
gctgcttctctagcggccggaactaactataattccattccatcttctctgatctctgat
atcaagaaagtgaaaggggtcaagagtgcctttgccctgatgaccatgaccaacgccgcc
ctggtcggcaaggatggcacggcagtgggagcaggaacaacaggaatcacggcagtgtcc
atggcaaagaatgctacctggagatctgtttcttttataaagggaacgtatccccatggg
gccggtcaggttagccttcttaagcagacggcggatgcagccgggttaaaagtgggggat
aaaactacttttgtttacgccagcggccctaaaaaggtaaagatttcaggaatcttcacc
ctgacttctgttgcccagggaactctttatgttggtattgatcctcaagttgttaagcag
gagagagtctatacggttttgggatcttccgcttctgctgcgtcttcttctacttcttct
gcttcttctactaatgcaaaaccttcatcgccggctccttctgcttctgctccatccctt
ccttcaggtcagggcggtaaccagaggcagatccaagagcagagacaggctcaagctcag
gcacaggcgcaggcaagagcccacgcgcaagcacaggctaaagcccaggcgcaggcccgt
gcccaggagcaggctcggcgcaaggcttatcaggaggccaacgcctatatttccgtcatc
accgtctatggcacaggcagtaagggacgtcccctgacagacagtcagcagaaggcattg
gcgaagagagtcaatgccatgttggatgcaaaatcctccaacaaaggcaaaaccaaggct
gctgcaattaccggtgatgctttgagggcagagcagaaagacggcatcaacagcatgatg
ggctttatccagcctatgattctgatttttgcctttatagccctcttcgtgggtactttc
atcattgctaataccttttccatgattgtccgcgaatccatgcggaggtacgccctgctc
aggtcagtaggtgccagtcccagccaggttttcactacggtcattattcaggccctggtt
atgggcctggtcgggtcagttcttggcatcttcctaggttgggggatgatgtcccttata
tcggtagggctctcccggtcaggctcgcccctgactggctcttcccgcccgggcctgaat
gccattatcattggcctgattgttggcttggcagtatcgttgattggtgctgcccttcct
gcccgtcgggcagccctggcaccgcctattcaagccatgaatgaaacagtcaatcctcag
aagtccaccaggggccgaggctggctgggtctggcaatctttctgttgggagtccttttt
tggttcctgtctttgtccctggttgcttatgacggtccggaaggccagggccccacaccc
ttgagctggcttaattccttctctccggatgcagccctgggctggggagctttgtttatt
atcctgtcagttattgttatgaccccctccttggtggtccctgcccaaaagatattaggc
gttattccccagctactcttcccggtgtcagggaaactggcctcccgcaatctggacagg
tccaagaggcggactgccaatacagcagctgccctctttgtcggtctggctatcgtcagt
tgcgtaggaacgctggcatccaccttaaccgcatcgacagccggtctgattgacgagggg
atgaccgctgattttgctatccggtcgcagaccatgaccataccgaccgatctcgataag
aaactagcaaaaacagaggggataaggtctgtgactaaagtcaccatgattccccgtctc
aaatttaacggcaaacagattaatggttttagcatgacggccaaagatactcttttcaag
gacgtatacaagcctcatatgatatccggatcggctgtctcagccattagtaaagatcag
ctggttgttggcaaaactattgctgatgacaacaagtggtcggttggcacggttctgacc
gtgaagtctcctgatgccaccagaaaaatcaaaatcggcgctattactgactcagcaacc
tacactaattcaatctacctgtccagcaaggtatctgatcagctgcggaagagttatgcc
ggagttaccttggccctttatgtgtcagccaagccgggaactaacctgaccagtctggaa
aagaagctgaaaaagcaggtcaagaagtactatgttctcacagtgatgaacaaagaggag
cttaaatccagcatcgccaccctgatcaacaatatcatggtcatcatttatgccctcctc
gccctgtctatccttatagcaatttttggagtggtaaacactatggccctatcggtgtcg
gaaagaacccgggagattggtctgctgagggctattggcaccagcaatggccaggttcag
ggcatgatcgccatagagacagtgatgatttccgtcctgggaactgttgagggaattgtc
accggtctggctgccgggattgttattcagcaggtttacaaggacagcggcctgggaacc
ctcagcattcctttcaaacagttgctgattttcctgattctgtctgttctgatcggtctt
ctggccagcttgtctccgtccaggcgggccctgaaggttcccgttctgaatgcagtcagc
gatgagtag
DBGET
integrated database retrieval system
