Scardovia inopinata: SCIP_0334
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Entry
SCIP_0334 CDS
T03977
Name
(GenBank) Clp protease
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sij03110
]
SCIP_0334
Chaperones and folding catalysts [BR:
sij03110
]
Heat shock proteins
HSP100
SCIP_0334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
NBD_SMAX1
AAA_14
ATPase_2
nSTAND3
AAA_7
TniB
AAA_18
IstB_IS21
AAA_24
Mg_chelatase
NYD-SP28
T2SSE
Zeta_toxin
HOOK
bpMoxR
ANGPTL8
NAAA-beta
DNA_pol3_delta2
ResIII
AAA_19
MscS_porin
FKBP15
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
BAR06401
LinkDB
All DBs
Position
426889..429522
Genome browser
AA seq
877 aa
AA seq
DB search
MDEKFTTLAQEAIGDALQTASAAGNPQVEPIHLLDALLRQDGGVVKGLIKETGADPQAIG
GDTRRALVNLPAASGSSTTQPSASRQLSVVLSEAKNQMTSLGDDYISTEHLLIALAMGQN
EAGEILRTAGASPEELRKAVPQVRGGARVTSPDAEGTYKALEKYSTDLTEQAREGKLDPV
IGRDAEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVAGDVPTGLKNKKIVSL
DMSSMVAGSKYRGEFEERMKAVLDEIKKANGTIITFIDEIHTIVGAGATEGSMDAGNMLK
PMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGLKQRYEAH
HKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSEPEEIDELQRRVT
RLEMEEMQLKKAEDTASKERLEKIQSELADAREKLAGLNTRWSAEKADRNKVGDLRAKLD
SLRVQADKATREGNLESASKILYGDIPEIQKQLAAAENTAKSAGSESGSESGSDHESEPM
VPDHVDADSVASIVSSWTGIPVGRLMQGENEKLLTMEDQLSKRVVGQKEAVRAVSDAVRR
SRAGISDPDRPTASFLFLGPTGVGKTELAKALADFLFDDERAIVRIDMSEYMEKESVSRL
IGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRT
VDFKNTILIMTSNLGSQFLVDMDLSPEQRHSAVMDAVHAHFKPEFINRLDDLIIFNPLTR
QELGSIVDIQVSRVAARLTDRRITLDVTDSAREWLADTGYDPAYGARPLRRLVQSEVGDQ
LARMLLSGQVHDGDTVLVDQTGGEHLELTSWPTENLV
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaaatttactactctggctcaggaagcaattggagatgccctacagacggca
tcggctgccggaaacccacaggttgaaccaattcaccttttggatgccctcctgcgtcag
gatgggggagttgtcaagggcctaatcaaagaaaccggggctgatccccaggccattggg
ggcgatacacgccgggctttggtcaatctgccagcagccagcggatcgtcaacaacccag
cccagtgccagccgtcagctgtcagtggtcttgtctgaagcaaagaatcaaatgacctcc
ttgggggatgactatatttcaacagagcacctgctgattgccctggctatgggccagaat
gaagctggcgaaattctgcgtacagccggcgcctctcccgaagaactgcggaaggcggtg
ccccaggtgcgcggcggcgctcgcgtgaccagtccggacgctgaaggaacatacaaagct
ttggaaaagtattccacagatctgactgaacaggccagggaggggaagctggatccggtg
ataggccgtgatgcagaaatccgtcgggttattcagattctgtcccgcagaaccaagaat
aaccctgtcctgatcggtgaacccggagtaggaaagactgctgttgtggaaggcctggcc
cagcgtgttgtggccggagatgtgcccactggtctgaagaataaaaagatcgtttcactg
gacatgagctccatggtggctggcagcaaataccggggtgagttcgaggaaaggatgaag
gcagttctggatgaaatcaagaaggccaatggcactattattaccttcattgatgaaatt
cacaccatcgttggcgccggcgcgacagaaggatctatggacgccggaaacatgctgaag
cctatgttggcccggggtgaacttcgtctgatcggtgccacgaccctagatgagtatcgc
gaaaacattgagaaggatccagccctggagcgccgcttccagcaggtatttgtgggtgaa
cccagcgttgaggacacggtggcgattcttcgcgggctcaagcagcgctacgaggctcac
cataaggtaaccattggggatgatgccctggtggcagccgcaaccttgtctaaccgttat
atttcaggccgtcagctgcctgataaggcgattgatctggtggatgaggctgctgctcat
ctgcgtatggagttggattccgagcctgaggaaattgatgaacttcagcgccgggtaaca
cgcttggaaatggaagaaatgcagctgaagaaggctgaagacaccgcttccaaagaacgt
ctggaaaaaatacagtcagaactggctgatgcccgggaaaaactggccggtctcaatacc
cggtggtctgccgaaaaggctgatcgcaataaggtaggtgacctaagggctaagttggat
tctttacgggtccaggccgataaggcaacgcgtgaaggtaatttggaaagcgcttccaag
attctttacggtgatattcctgagattcaaaagcaactggctgcggcagaaaatacggca
aaatcagcggggtcggaatctggctcagaatctggctcagaccatgagtctgagcccatg
gttcctgatcatgtagacgctgactctgtggcttccatagtctccagctggactggtatt
cctgttggccgtctcatgcagggggagaacgagaagcttctgaccatggaagaccagctg
agcaagcgggtcgttggtcaaaaagaagctgtcagggctgtatctgatgccgttcgccgt
tcccgggcaggaatttccgatcctgacaggcctactgccagcttcctctttctgggacca
accggagtgggaaagactgaactggctaaggctcttgctgattttctcttcgatgatgaa
cgggcaatcgtgcggatagatatgagcgaatacatggaaaaggaatccgtttcccgtctg
attggagccgctcctggttatattggctacgaggaaggaggccagctgactgaggctgtc
cgccgccgtccttattcggtggtcctctttgacgaagtggaaaaggctcatcctgaagtt
ttcgatgttcttctccaggtgctggatgatgggcgtctgactgatggtcagggcagaacg
gtagatttcaagaacaccatcctgattatgacttccaatctgggttctcagttcctagtg
gatatggatctgtccccagagcagcgccacagtgctgtcatggatgcggttcatgctcac
tttaagcctgagtttattaatcgtctggatgatctgattattttcaatcccctcacccgc
caggagctgggttctattgtggatattcaggtatcgcgcgtcgccgcccgtcttaccgac
cggcggatcaccctcgatgttactgactctgcccgcgaatggctggcagataccggctat
gatcctgcttacggagcccgtcccctgcgccgcctggttcaaagcgaggtaggcgaccag
cttgcccgtatgctcctgtcaggccaggttcatgatggcgacacggttttggtagatcaa
accgggggagaacatctggaactgacgtcctggccgactgaaaacctggtgtaa
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