Scardovia inopinata: SCIP_0361 Help Entry SCIP_0361         CDS       T03977                                  Name (GenBank) CRISPR-associated protein   KO K09952   CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] Organism sij  Scardovia inopinata Brite KEGG Orthology (KO) [BR:sij00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:sij02048]     SCIP_0361 Prokaryotic defense system [BR:sij02048]  CRISPR-Cas system   Type II CRISPR-Cas system    Type II signiture cas proteins     SCIP_0361 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cas9_a Cas9_b_hairpin RuvC_III Cas9_Topo Cas9_C HNH HNH_5 HNH_4 Endonuclease_7 Motif Other DBs NCBI-ProteinID:  BAR06428 LinkDB All DBs Position 463923..467435 Genome browser AA seq 1170 aa AA seqDB search MAKKKISYRIGIDVGLNSTGLAAIEVDDDGAPIRILNTMSVIHDGGVDPDAAKVRGTRLA ISGIARRTRRMRRRRAKRLDRLEQILEKYGYTDTEPVLEEPYGPWICRAELADGFINDDE QRRMMIGIAIRHIARHRGWRNPYQNVRALLNIDDSDLSEEYKNLKEKVQDQINDGKDLPN FTPSQLVRDYLDNFSGQPAARIRTGKAGPRGNRRDAVGILPQRMRQSDYAYELQRIFDMQ KIGRDEAQELLMAVFEAKSPKGSAEKRIGKDPLTGKKRALKASLAFQKYRIVATITNLRI KTGTGSERMLSPTELNDIYTYLLRVQDDNHLPTWEDICEEVLHIGRYQLAGIGKTFEGGE RISNMPPVIQTSLAIHGLSEGTLAEKLTKWWDKADDDSRESMIKLLSNTVDIDRVNEVDE NFASALDFIDSLDDEELTKLDKIALPRGRAAYSEEALNKLTADMLNTGDDLFSARQRIYH VNNSWRPPQPPIGEPLGNPAVDRVLKITNRYLMNCLNRWGQPRRVTIEHTRSGFTSVKQA TEHQKISDKRAEYRRDIVKQLEEAGVESVHEYDIRRWEAVQRQNGQCLYCGRDITFKTCE MDHIVPRKGPGSTNTRTNFAAVCPECNRMKSNIPFASWAETKEAKDRGVSLDKAIKQVRF FNFTKNEYSPQAQRNFKKSMIERLKQKTSDEPLDNRSIESVSWMADELYKRIDWYFNHEQ YETSKKAINDDKDNLSGTQVVVYPGSITAEARNAAGLGGNIHFIGGRYKTRLDRRHHAVD ACVIAMMEPGIARILTERNQLRQAQRLTARIEDDEVNWKDYPTENTAGYNKYQAWSDRMH ALLEYMNNALDYDKIPVVRWERLQLGNRSAHEDTIHPLKKLPLSHEISAIDINHASTPAL YEALVSLPDFSEQDGLPADPSRQINVNGERYSGDDLVSFFNSNAAQIAIQGGSAELGTAF HHARIYRCWTVGKNGKKKIFFGMIRVYQHDLLHAKNEDLFTYPLKRSSVSMRYAKKEVVH AILSGNAEYVGYLCVGDELVLDLKGDKSNDEGGSRLSGQVGEFVQKFEEDSKVNSQIVNR WTVDGFPDEAKLRLRPSMFAGEGLKNMKSELVENAAIKNILSKTGWRVSVDVISKKSPVV LRRNAFGEPRWKTNAGLPVSYRWQDTETKE NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggctaagaagaaaatttcttatagaattggtattgatgttggtttgaattctaccgga ttggcagctatcgaagttgatgacgatggtgcaccaattcgtattctgaatactatgagt gtaatccacgatggcggtgtggatccggatgctgcgaaggtgaggggaacacgcttagct atttctggcatagctcgaagaacacggcgcatgaggaggagaagggcaaagcgcttggac cgtcttgaacagattctggagaagtatggatacacagatacggaaccggttttagaagaa ccttacggcccctggatatgcagagcggaactggctgacggcttcatcaatgatgacgaa cagcgcagaatgatgataggcattgctatcaggcatattgcacgtcatagaggttggaga aatccttaccagaatgttcgagcattgttaaatattgatgattcagatctttccgaagaa tataagaatctcaaagaaaaggtacaagatcaaattaatgacggaaaggatctgcctaat tttactccttctcaattagtcagagattatcttgataatttttccggacagcctgcagca agaattcgaacaggaaaagctggtcctcgggggaatagaagagatgcggtaggtattctt cctcaacgaatgaggcaatccgactatgcatatgagttacagcgtatttttgatatgcag aaaattggcagagatgaggctcaagaattgcttatggctgtttttgaggctaaatcgcca aaaggatcagctgagaagaggattgggaaggatcctttaacaggaaagaagcgggcatta aaggcatcgctagcatttcaaaaatatcgaattgtagcaacaattacgaatctacgaatt aaaactggtactggttctgagcgtatgctttccccaacagaacttaacgacatttataca tatttattacgtgtgcaagatgacaatcaccttccaacgtgggaagatatctgcgaagag gtcttgcatattggcaggtatcaactagctggaatcgggaaaaccttcgagggtggagaa cgtatttccaacatgccacctgtgattcagacaagtttagcgatacatggattgtcggaa ggaactcttgctgaaaaactcactaagtggtgggataaagcggatgatgattctcgagaa agcatgattaaactactttcaaacactgttgatattgatagagtcaatgaggttgatgag aattttgcttctgctcttgattttattgactcacttgatgatgaggaactaactaaatta gataagatcgctctgcctcgtggccgtgcagcttattctgaagaggctctgaataagctg actgcagacatgttaaatacaggtgatgaccttttctctgcacggcaaagaatataccat gttaacaatagctggaggccccctcagccaccaatcggtgagccattggggaacccggca gttgacagagtattgaaaattaccaaccggtatcttatgaattgtttgaataggtggggc cagccaagacgcgttacaattgagcatactcgtagcggttttacatcagtaaaacaagca actgaacaccagaaaataagtgataagagagccgaatataggcgagatattgtaaaacaa ttggaagaagctggtgtagagtctgtccatgaatatgatattaggcgctgggaagcagtt caaaggcaaaatgggcaatgtttatattgtggaagagacatcacctttaaaacgtgcgaa atggatcatattgttcctcgaaaggggcctggatcgacgaacacgagaactaactttgca gccgtttgccctgagtgcaacagaatgaagagcaatattcctttcgcctcctgggcagaa acaaaagaagcaaaggaccgtggcgtatctctagacaaagctataaaacaagttagattc ttcaattttacaaaaaacgaatattcaccgcaggctcaacgcaatttcaagaaatcaatg attgagcggttaaaacagaaaacatctgatgagccgcttgataatcgttcaattgaatct gtctcttggatggcagatgaattgtataaacgaattgattggtactttaaccatgaacaa tatgagacttctaagaaagcgattaacgatgataaggataatttatccgggacccaggtt gtagtctatccgggtagtattacggcagaagcacgtaacgctgcggggcttggtggaaat attcatttcatcggtggtagatacaaaacacgtcttgatcgcaggcatcatgcggttgat gcatgcgtaattgcaatgatggagcctgggatagccaggattctcactgagcggaaccaa cttaggcaggcgcaaagacttactgctcgaattgaagatgatgaagttaactggaaagat tatcctacagagaatactgcgggatataacaagtaccaagcatggagtgatcgaatgcat gccttattagagtacatgaataatgcactagattacgacaaaattcccgtggttcggtgg gaaaggcttcaactagggaataggtccgcacatgaagatactattcatccattaaaaaag ttgccattatcgcatgaaatatcagccatagatattaaccacgcttcgactccagcttta tatgaggcgctggtttcgctccctgatttcagcgaacaagatgggttgccagctgatcca tctcgccaaatcaatgttaatggggagaggtattccggagatgaccttgtgtcatttttc aattcgaatgctgcacaaatagcgattcaaggagggtcagccgaactcggtacagccttc catcatgcccgcatctatcgttgctggactgtcgggaaaaatggtaagaagaaaattttc tttggtatgattcgtgtttatcaacatgatttgcttcacgcgaagaatgaagatttattt acatatccgctcaagagatcttcagtatctatgcggtatgctaagaaagaagtggtacat gctattctttctgggaatgctgaatatgttggatatctctgtgtcggtgatgagctagtt cttgatctaaaaggtgacaaaagtaatgatgaaggcggctcaaggctaagtggacaggta ggagaatttgtccagaaatttgaagaagattctaaagtcaattctcaaatcgttaatcgg tggactgttgatggttttcccgatgaggctaaactccgtctacgtccttcaatgtttgct ggtgaaggtttgaaaaatatgaaaagtgagctagtggagaatgcagcaataaagaatatt ctttctaaaactggatggagagtgtctgtggacgtaatatcaaagaagagtcctgtagta ctccgacgtaatgcttttggagaaccaagatggaaaactaatgcggggcttcctgtttca tacagatggcaggacactgaaaccaaagaatga

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