Scardovia inopinata: SCIP_0374
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Entry
SCIP_0374 CDS
T03977
Name
(GenBank) transcriptional regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sij03000
]
SCIP_0374
Transcription factors [BR:
sij03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SCIP_0374
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
HTH_3
HTH_31
HTH_26
HTH_IclR
TetR_N
HTH_Tnp_ISL3
YdaS_toxin
HTH_17
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BAR06441
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All DBs
Position
487069..488037
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AA seq
322 aa
AA seq
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MKFMTTLSDVARVAGVSKNTVSRYLNNRGYISDKTAKAIDNAIDVLNYKPNQLARSLHSQ
RTNLVGLVVPDIAHPFFSTVTSFIEDELDRRGYRMILCNTLHSSDKEKNYIDMLISNKVD
GIIIGSHSVDINYSRINAPIVALDRYLAPTIPVVSSDHIQGGLIASQAFIQKGVHRVLQI
SASSKVKTPSSLRHEVFAKELRIHGIDVVTKELAPNQFEFSTYIKTANEILDSDFNFDGV
FSGDSVAVAIQRSALLRGIRVPEDLFIFGYDGTFLSEAVYPSMPTIGQQFDKLSRLTVEV
LCKLMNKEPLTDLAYTIPVLKV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttatgactactctgagtgacgttgcccgggttgcaggagtctctaagaatact
gtctcccggtatttaaataaccgtgggtatatttctgataaaaccgccaaggcaattgat
aacgctattgatgtattgaattacaagcctaatcaattagctcgcagcctgcactcgcag
agaacaaatttagtagggttggttgtcccagacattgcgcatcccttcttttctacggta
acatcgttcattgaggatgagcttgaccgccgtggatatagaatgattctgtgcaacaca
ctgcattcttctgataaagagaaaaattacatagatatgctgatttccaataaagtggat
ggaataattattggatctcattcagtagatattaattattcacgtattaatgctccaatc
gttgcacttgaccgttacttagcaccgactattcctgtagtctcatcggaccatatacag
ggcgggcttatagcctcacaggcttttattcaaaaaggagtgcatagagttcttcagatt
tcggcatcttccaaagtcaagactccttccagcttaaggcatgaggtattcgccaaagaa
ctgcgcattcatggcatagatgtcgttaccaaagagctcgctcccaatcaatttgaattt
tcaacatatattaaaacagcgaatgagatattagactcagattttaatttcgatggagtt
ttttccggggactcagttgccgtcgctatacagagaagtgcattgcttagaggtattcgc
gttcctgaggatctctttatttttgggtatgatggtacttttctgtctgaggctgtatac
ccttctatgcctactattggtcagcaattcgataaattatctcgcctgactgtcgaagtt
ttatgtaaattaatgaataaagagccactgactgatttagcatatacgattcctgttttg
aaggtttga
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