Scardovia inopinata: SCIP_0426
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Entry
SCIP_0426 CDS
T03977
Name
(GenBank) putative ABC transporter substrate binding component
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
sij
Scardovia inopinata
Pathway
sij02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIP_0426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sij02000
]
SCIP_0426
Transporters [BR:
sij02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
SCIP_0426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
BAR06493
LinkDB
All DBs
Position
544209..545570
Genome browser
AA seq
453 aa
AA seq
DB search
MVHTKTVKISKALAAICALAMGAAGLSACGGSSAATTDANGKPIVNISVRRNTTTVKLAN
TAWAKQLEKKCNCTIKWTEITDNAWGQQKAAKMAAGDFPDIGMSMYDKTDISKYSSQFEN
LQPYLNKMPNVKKFFKAKPIAEKMVKEGNNIQILPSDRGKGYRVAGTHMFINKTWLDKLG
LKVPTTWDELENVLKAFKEKNPNGNGKADEVPMNIRGLGFGLWSPLSLMNSTGVTTVFMG
ASASSQGYYAKNGKVASYYTSDNLKRVLKYLNKLMSEGLIPKDALTRDSSKYDAQTVSDG
KTAITGFAFGWSANSEFGKLGSQYISLPSLKEKASTPDKDVKWDYTQNWAEFAYSLTVSK
KAANKDAIWKVINAMYDPEVSVQQYFGDIPQYVKKSGNTYTVSDKVYEKYVDTREISAQD
RFAGWIPDDVTIKGLHPSWSGQCLQCDCCPVLL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggttcacacaaagactgtgaaaatcagtaaagctcttgctgctatctgtgccttagca
atgggtgcagcagggttaagcgcctgcggaggatcatctgcagcaacaacagatgccaac
gggaagcctattgttaatatttccgtcaggcgtaacactacaactgtaaagctggccaat
acggcttgggccaagcagttggaaaagaagtgcaactgcactattaaatggactgaaatc
actgataatgcctggggacagcagaaggcagccaagatggcagccggcgatttccccgac
attggcatgtccatgtacgacaaaaccgatataagcaagtattcttctcagtttgagaac
ctgcagccgtatctgaataagatgccgaatgtaaagaaattcttcaaggctaagcccatt
gctgaaaagatggtgaaggaaggcaataacattcagattcttccatcggatcgtggcaaa
ggctacagggtagcaggaactcacatgtttatcaacaaaacctggcttgataagcttggt
ctgaaggttcctaccacctgggatgagctggagaatgtgctcaaggccttcaaggagaaa
aatcctaacggcaatggcaaggctgacgaagttcctatgaacattcgcggtctgggcttt
ggcctgtggtctcctctgtctctgatgaattctactggcgtcaccactgttttcatgggc
gcttcagcttcatcacagggctattatgccaagaacggcaaagttgccagctactacacc
agcgataatctcaagcgtgtgctgaagtatttgaacaaactcatgagcgaaggtctgatt
cctaaggatgctcttaccagggacagctctaagtacgatgctcagactgtcagcgatggc
aagacagcaatcactggttttgcatttggctggtctgctaattctgagtttggcaagtta
ggcagtcagtatatttccctgccttctttgaaggaaaaggcttctactccagataaggat
gtgaagtgggattatacccagaactgggctgagtttgcatactctctgactgtttccaag
aaggcagccaacaaggatgccatctggaaggttatcaacgccatgtatgaccctgaagta
tcggttcagcagtactttggcgatatcccccaatatgttaagaagagtgggaatacctac
actgtttctgacaaggtctatgagaagtacgtggatacccgcgaaatctctgctcaggat
cggtttgctgggtggattcctgatgatgtcacgattaagggtcttcatccttcctggagc
ggtcagtgtttacaatgtgattgttgtccggtccttctttga
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