Scardovia inopinata: SCIP_0436
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Entry
SCIP_0436 CDS
T03977
Name
(GenBank) ABC transporter ATP-binding component
KO
K06020
energy-dependent translational throttle protein EttA
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sij03016
]
SCIP_0436
Transfer RNA biogenesis [BR:
sij03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
SCIP_0436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
AAA_23
MMR_HSR1
NB-ARC
AAA_16
AAA_29
AAA_22
AAA
Dynamin_N
AAA_14
ATPase_2
AAA_15
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAR06503
LinkDB
All DBs
Position
complement(555548..557227)
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AA seq
559 aa
AA seq
DB search
MAEFIYQMINARKAFGDRVILDDVTLSFLPGAKIGVVGPNGMGKSTLLRIMAGLDTVSDG
ESTLTPGYTVGILQQEPPLDETKTVGENIEMAFGDIQQKVRRFNQIGEEMANPNADFDAL
MEEMGELQTAIDAANGWDLESQLSQAMDALQCPDPDTPVKVLSGGERRRVALCKLLLEAP
DLLLLDEPTNHLDAESILWLEQFLHTYQGAVLAVTHDRYFLDNVAEWICEVDRGHLYPYK
GNYSTYLETKAKRLEVQGQKDAKLARRLNNELEWVRSSPKARQAKNKARLERYEQMEQEA
RNSKKLDFSEIQIPPGPRLGSKVLEASHIHKAFGDRVLIDDLSFTLPRNGIVGVIGPNGV
GKTTLFKTIVGLEPLTSGSLEIGDTVKISYVDQGRSGLDPAKNLWEAVSDGNDFIEVGGV
EIPTRAYVASFGFKGSDQQKLTGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL
ESLENALIAFPGCAVVVSHDRWFLDRIATHILAWEGTDDNPANWYWFEGNFQAYQDNKVA
RLGEEASKPHRLHRKLTRG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaatttatttatcaaatgattaatgcccgcaaagcttttggcgatcgcgtcatc
cttgacgatgtaaccctaagctttttgcccggagctaaaattggcgtggtgggtcctaac
ggtatgggcaagtctaccctgctgagaattatggcagggctggacactgtctccgacggg
gaatcaaccctgactcccggctatacagtaggcattctccagcaggagccgcctttggac
gaaaccaaaaccgttggcgaaaacattgaaatggcttttggagatattcagcagaaggtc
cgccgctttaaccagattggcgaagaaatggctaatccgaatgcggatttcgacgccctg
atggaagaaatgggcgagctgcaaacagctatcgatgcagctaatggctgggatctggaa
agccagctctcacaggctatggacgcgctccagtgcccggatcctgatactcctgtaaaa
gtgctgtcaggaggcgaacgacggcgagttgccctctgcaagcttctgctggaagcgccc
gaccttctcctcctggacgagcccaccaatcacttggatgcagaatcaatcctctggttg
gagcagttcctccatacctatcagggagccgttctggcagtcacccatgaccgctacttc
cttgacaatgtagctgaatggatctgcgaagttgaccggggacacctctacccatacaag
ggaaactattctacctatttggagacaaaggcaaaacgtctggaagttcagggccaaaag
gatgcgaagctggctcggagactgaataacgaactggaatgggtccgttcttctcccaaa
gcccgccaggccaagaataaggcccgtctggaacggtacgaacagatggagcaggaagcc
cgtaactccaaaaaacttgacttttctgaaattcagattcctcctgggccgcggctgggc
tccaaggttttggaagcttcccatattcataaggcttttggagaccgggttttgattgac
gatctgagctttaccctccccagaaacggaattgtaggtgtaatcggccccaatggcgtg
ggaaagaccactctctttaagaccattgtgggactggaaccactgacgtcaggcagcttg
gaaattggtgatacagtaaagatttcctatgttgaccagggccgctctggtctggaccct
gctaagaatctgtgggaagcagtctctgacgggaacgattttattgaggttggcggggta
gaaatccccactcgggcttatgtggccagctttgggttcaaaggatccgatcagcagaaa
ttgactggggtcctgtccggaggcgagcgcaaccggctgaacctggccttaaccttaaaa
cagggaggaaatctgctcctgctcgatgagccgacgaacgatttggatgtggaaactctg
gaaagtttggagaacgccttaattgctttccccggatgcgccgtggttgtttctcatgat
cgttggttccttgaccgaattgccacgcatattctggcctgggaaggaacagatgacaac
cctgcaaactggtattggtttgagggtaatttccaagcttaccaggacaataaagtggca
agattgggagaagaggcttcgaagcctcaccgtctgcatcgcaaacttacccgcggttaa
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