Scardovia inopinata: SCIP_0458
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Entry
SCIP_0458 CDS
T03977
Name
(GenBank) putative helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sij03032
]
SCIP_0458
03029 Mitochondrial biogenesis [BR:
sij03029
]
SCIP_0458
Enzymes [BR:
sij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SCIP_0458
DNA replication proteins [BR:
sij03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
SCIP_0458
Mitochondrial biogenesis [BR:
sij03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
SCIP_0458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
AAA_5
Viral_helicase1
AAA_14
SH3_13
AAA_24
AAA_16
NTPase_1
TrwB_AAD_bind
Zeta_toxin
CobA_CobO_BtuR
AAA
MeaB
nSTAND3
SLFN-g3_helicase
cobW
nSTAND_NTPase5
Zot
ABC_tran
ATPase
NAT10_TcmA_helicase
ATPase_2
Herpes_Helicase
DAP3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAR06525
LinkDB
All DBs
Position
580785..582260
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AA seq
491 aa
AA seq
DB search
MSSGASVFLTGAPGAGKTYVLNQFISQARSKGEIVAITASTGIAATHIDGQTIHSWSGIG
VDTVLTASVLKRIKTRRRRAIKDTDILVIDEVSMIHAWLFDMVDQVCRSIKRSDQPFGGI
QVILSGDLFQLPPVSRTRANSDPYSMAEPSPEFLAARQCYAQEGLNPEGFITQALCWKRL
NPVICYLTEQHRQDAGELLSILTDIRLGQTTNDDILSLSSRVGLNPDSSDLVHLFPFNRA
ADALNQSQLDRIHQDEHIFLAQSAGSAQLVQRLKKNMLAPEQLVLKEGAAVMALRNDADR
QFVNGSLGKVVGFLNRKKGGYPIVEFDNGNTVTMSPATWEMLDGEEVLAAVSQVPLRLAW
GITIHKSQGMTLDRAVMDLRRTFAPGMGYVALSRVQSLEGLYLLGISSQAFYVSLDTIRE
DALLQQMSGSHISNLENLKDENRQGINPQDMNPNEANLHGGIWENPQEGRGRDVEIEKYD
GREEFGQGQLF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggagcttcagtctttctgactggggctccgggggcgggtaagacatatgtt
cttaaccaatttatttcccaagcccgcagcaagggggagatcgttgcaataacagcctca
acaggcatagcagcgactcacatagatggacagactattcattcctggagcggaattggg
gttgacacagttctgaccgcatcggttcttaagcggattaaaacccgccgccgcagagcc
atcaaagacacggatatcctggttattgatgaggtatccatgatccatgcctggcttttt
gacatggtcgatcaggtatgtcgatctataaaacggtcagaccagccttttggcggtatc
caggtgatcctctccggagatctcttccagctgcctccggtcagcagaacccgtgcaaat
tctgacccttacagcatggctgagcccagtccagagtttcttgcagccagacagtgttac
gctcaggaaggccttaatcctgagggatttattacccaggctttgtgctggaagagactg
aatcctgtcatttgttatttgactgagcagcatcggcaggatgcaggtgagctcctgtca
atcctgactgacatccgtttaggacaaaccacaaacgatgatattctatccctgtccagc
agagtaggccttaaccctgattcgtcagatcttgttcatcttttccccttcaaccgtgct
gctgatgccttgaatcagagccaattagacagaattcatcaggatgagcatatttttctt
gctcagtcggcaggatctgctcagctggtgcagcggctgaagaagaatatgctggccccg
gaacagcttgtgcttaaagaaggcgcagcggtgatggccctgcgcaatgatgcggatcgg
cagttcgtgaatggttctttggggaaagttgttgggtttcttaatcgaaagaagggcggt
tatcccattgttgaatttgataatgggaatacggtcaccatgtctcctgctacctgggaa
atgctggatggggaagaggtccttgctgccgtcagccaggttcctctccgcctggcctgg
ggaataactattcacaaatcacaaggaatgactctggatagggctgtcatggatttacgg
agaacctttgcgcctggtatgggctatgttgccctctcccgggttcagtccctggaaggt
ctgtatttgctgggaatcagctctcaagcattttatgtatctcttgacactattagggaa
gatgctcttctgcagcagatgtcgggcagtcacatttccaatctggaaaatctgaaagat
gagaatcgccagggcataaatcctcaggatatgaatccaaacgaggcaaatctccatggc
ggaatctgggagaatcctcaggaaggaaggggaagggacgtggaaattgagaaatatgac
ggaagggaagaatttgggcaaggccagcttttttaa
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