Scardovia inopinata: SCIP_0540
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Entry
SCIP_0540 CDS
T03977
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sij
Scardovia inopinata
Pathway
sij03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SCIP_0540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sij03011
]
SCIP_0540
Ribosome [BR:
sij03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SCIP_0540
Bacteria
SCIP_0540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BAR06607
LinkDB
All DBs
Position
686395..687879
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AA seq
494 aa
AA seq
DB search
MTDKNKEVEKVAINDIGTVDDFIKAVDSTIKNFDDGDLVEGTVVKIDRDEVLLDIGYKTE
GVIPSKELSIKKDVDPEDVVQVGDTIEALVVTKEDKDGRLILSKKRAQYERAWGDVEKIK
EADGVVEGTVIETVKGGLIVDIGLRGFLPASLVEMRRVRDLAPYIGQRIQAKILELDKNR
NNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGTISSIVNFGAFVDLGGVDGLIHVSEL
SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKSTQEDPWQRFARTHVPGQIVKGK
VTKIVQFGVFVSVDDGIEGLIHISELANRHVDNPETVVKPGEEVFVKVIDVDLDRRRISL
SLKQANDSVDPTSEDFDPALYGMPAEYDENGNYKYPEGFDPETNEWIEGYEKQREEWESQ
YAAAHDLWEEHKAFATKELENAAASAAEDGQAPAAEPHREEEATTTYSSTEKAEGTLAAD
DQLAALREQLLNEQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacagataagaataaagaagtcgagaaggtagcaatcaatgatattggtaccgttgac
gacttcatcaaggcagtcgactccaccatcaagaattttgatgatggtgacctggttgag
gggacggtagtcaagatcgatcgtgacgaagttctcctcgacatcggctacaaaactgaa
ggtgttattccttcaaaagaactctccattaagaaggatgtagatcctgaagatgtcgtc
caggttggtgataccatcgaggccctggtagtgaccaaggaagataaggatggccgcctc
atcctctccaagaagcgcgcacaatatgaacgtgcctggggtgatgtggagaaaattaag
gaagcagatggtgtggttgaaggcaccgttattgaaaccgtcaagggcggtctcattgtt
gatattggtcttcgtggcttcctgcctgcatctctggttgagatgcgccgtgttcgtgat
ctagctccttatattggtcagagaatccaggctaagattcttgaactcgacaagaaccgc
aacaacgtggttctgtcccgtcgccagtatctggaagaaacccagtccgaagttcgtgag
accttcctgtcccagcttaagaagggtcagattcgggaaggtactatcagctctatcgtc
aactttggtgcattcgtcgatcttggcggcgtagacggtctgattcatgtttctgagctg
tcatggaagcatattgatcacccgtcagaagttgttaaggttggagataaggtcaccgtt
gaggttcttgatgtggatctcgaccgggagcgcatttccctctctctgaaatccacccag
gaagacccctggcagcggtttgcccgcactcatgttcccggacagattgtcaagggcaag
gttaccaagattgtccagtttggtgtctttgtatccgtggacgatggcattgaaggcctg
atccatatttctgaattggctaaccggcatgtggataatcctgagactgtggttaagcca
ggtgaagaagtcttcgtcaaggttattgatgtggatctcgaccgccgccgtatttccctc
tccctcaagcaggccaatgattccgttgatcctacctctgaggacttcgatccagctcta
tatggtatgccggctgaatatgatgagaacggcaactataagtatcctgaaggattcgat
cctgaaactaatgagtggattgaaggctatgagaagcagcgcgaagagtgggaatctcag
tatgctgcagctcatgatctatgggaagagcataaggcttttgctaccaaggaactcgaa
aacgcagcagcttctgcggcagaggacggacaggctcctgctgccgaaccccatagggaa
gaagaagctactactacctattcctccactgagaaagctgaaggtactcttgctgctgac
gatcagcttgccgccctgcgcgagcagctgctcaacgaacaataa
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