Scardovia inopinata: SCIP_0552
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Entry
SCIP_0552 CDS
T03977
Name
(GenBank) putative glycogen operon protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sij
Scardovia inopinata
Pathway
sij00500
Starch and sucrose metabolism
sij01100
Metabolic pathways
sij01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SCIP_0552
Enzymes [BR:
sij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SCIP_0552
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
RF-1
Motif
Other DBs
NCBI-ProteinID:
BAR06619
LinkDB
All DBs
Position
complement(702945..705263)
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AA seq
772 aa
AA seq
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MQIRPGSMYPLGSTYDGIGVNFALYSSAATKVELCLFDENDHETRINVTECNTFIWHVYL
VGVQPGQRYGYRVHGAYDPEHGLRCDPSKLLLDPYAKAIDGMIDSDASLFSYDIMKPSDT
SARNTEDSAKHTMKSVVINPFFDWGNDRHPHIAYHDSVIYEAHVRGMTNLNEQVPPELRG
TYAGLAHPHMVGYLKNLGITALELMPVHQFINDSFLQAKGLSNYWGYNTIGFFAPHNAYS
SSGQRGQQVNEFKSMVKAYHDAGIEIILDVVYNHTAEGNDMGPTLSFKGIDNHSYYRLVD
GDERHYFDTTGTGNSLLMRSPHTLQLIMDSLRYWVTEMHVDGFRFDLAATLARQFSDVDK
LSAFFDIIQQDPVISNVKLIAEPWDIGSGGYQVGGFPPLWSEWNGMYRDTVRDFWRSQPS
KLPEFASRLMGSSDLYRADGRRPVASINFITAHDGFTMNDLVSYNNKHNEANGEGNNDGD
NNNRSWNCGVEGPTDVTDINELRSQQMRNFISTMMVSQGIPMINGGDEIMRTQQGNNNAY
CQDNSLSWTHWNLTDAQEELHDFTRKMIHIRLTHPVLHRRKFFNAIAPDGCSVPEVEWFD
HTGNVMDQEDWDNTNALTMMVFLNGHAIPESDVYGNQIVDNDFILIFNAYYESLMFQLPD
AKYGKKWKLLVDTHDPFSPELAYEAGFNIMAQSRSFLLLISDDNDVPLVTSQTQEAFQID
MNHGQAKKVKKQSEQSGQTVRSSLSPTSSDNPDRGISDKSSPAGDDQNKEEK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcgacctggttctatgtatcccctcggctcaacttacgatggcattggcgtt
aacttcgccctttattcgtcagctgcaacaaaagttgaactgtgtttatttgacgagaac
gatcatgaaacccgcattaatgtcactgaatgcaatacctttatctggcatgtctatctg
gtgggggttcagccggggcagaggtatggctacagggtgcatggcgcttatgatcctgag
cacgggctgcgctgcgacccctctaagctcctgcttgatccctatgccaaggcaattgat
ggcatgatagattccgatgccagtcttttctcctatgacatcatgaaacccagcgacaca
tctgcccgcaataccgaagactcagctaaacatactatgaaatccgtggttattaacccc
ttctttgactggggcaacgaccgccatccccacattgcctaccatgatagcgtcatttat
gaagctcatgtgcggggtatgactaatctcaatgagcaggttcctccggaattgagagga
acttatgccggacttgcccacccccatatggtaggttacctgaaaaatcttgggattaca
gccctggaactcatgccggttcatcagtttattaacgattccttcctccaggccaaaggc
ttgagcaactattggggttataacactataggcttctttgcaccacataacgcctattcc
agctccggtcagcggggtcaacaggttaatgaatttaaatccatggtcaaggcctaccac
gatgccggaatcgaaattattcttgatgtggtttataaccatacggcggagggcaacgat
atgggccctactctcagctttaaaggcattgataatcattcttactatcgtctggtggac
ggggatgaacgccactattttgatacaaccggtaccggcaattcccttctgatgcgttct
ccccataccctccagctgattatggattccctgcgctattgggtcacagaaatgcatgtt
gacggcttccgttttgatttggctgctaccctggcccgtcagttctctgatgtcgacaag
ctgtctgccttctttgacattattcagcaggatccagttatttctaacgtcaagcttatt
gccgaaccctgggatattggttccggcggctaccaggttggaggattccctcccctgtgg
agtgaatggaatggaatgtacagggataccgtccgtgacttctggaggtcccagccgtcc
aaactacctgaatttgccagccgcctgatgggtagttctgacctttaccgggctgatgga
cgccgtcctgtagcatctatcaacttcattactgcgcatgatggttttaccatgaatgat
ctggtcagctacaacaacaaacacaacgaagccaatggcgaaggcaataatgacggagac
aataataaccggtcctggaactgcggagttgaagggcctactgatgtaaccgatatcaat
gaactgcgcagccagcagatgcgtaatttcatttccaccatgatggtcagtcagggcatc
cctatgattaacggaggcgatgagattatgcgtacccagcagggtaacaacaacgcctac
tgccaggacaactccttatcatggacccactggaatctgactgatgctcaggaagagctc
catgattttacccgtaagatgatccatatccgtctgactcatcctgttctccaccggcgc
aagttctttaacgctatcgctcccgacggctgctcagtgccggaagtggaatggtttgat
cacacaggcaatgtgatggatcaggaagattgggataataccaacgccttgaccatgatg
gtttttctgaacgggcacgccatccccgagtccgatgtatacggaaatcagattgttgac
aacgattttattctcatcttcaacgcctattatgagtctctcatgttccagctgccggat
gcaaaatatggtaagaaatggaaactcctggtagacactcacgaccccttctcccccgaa
cttgcttatgaagccggtttcaacatcatggctcagtctaggagtttcctcctgctgatc
agcgatgataatgatgttcccctggtgacttcccaaactcaggaggcgttccagatcgat
atgaatcatggtcaggccaaaaaagtaaaaaagcagtcagaacaatcaggacagacagta
aggtcttcgctgtcccctacttcttctgacaatcctgacaggggcatttctgataaatct
tcgcctgctggagatgaccagaataaagaggaaaaatag
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