Scardovia inopinata: SCIP_0629
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Entry
SCIP_0629 CDS
T03977
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sij
Scardovia inopinata
Pathway
sij00061
Fatty acid biosynthesis
sij00071
Fatty acid degradation
sij01100
Metabolic pathways
sij01212
Fatty acid metabolism
sij02024
Quorum sensing
sij04146
Peroxisome
Module
sij_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SCIP_0629
00071 Fatty acid degradation
SCIP_0629
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SCIP_0629
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCIP_0629
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sij01004
]
SCIP_0629
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sij04147
]
SCIP_0629
Enzymes [BR:
sij01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SCIP_0629
Lipid biosynthesis proteins [BR:
sij01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SCIP_0629
Exosome [BR:
sij04147
]
Exosomal proteins
Exosomal proteins of breast milk
SCIP_0629
Exosomal proteins of breast cancer cells
SCIP_0629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAR06696
LinkDB
All DBs
Position
complement(789515..791566)
Genome browser
AA seq
683 aa
AA seq
DB search
MGFFDEVKTKVQELTASRKTSSASNHSSSPTNQQQYFTSQEDQPAQDENTWTANSQPIVH
YWSRDYPTTTGPDPVTGLLTSTTEGVKNIPDSTTIYSLYEDRARRTGDGPLFHFKDNGRW
VTRSANQALADIRATAKGLIHQGMKKGDCLAFMCRTSYEWDIIDAAVLSIGGVLSTIYDT
DSAAQIRAIVNNSDAKVLVVQTKDMLERADGAIDDCKSLKKIYCLENGALQEIQAYGRAV
SDDDLDERINSVRLDDICTIVYTSGSTSAPKGVELTQRNLVAFALNINAFIPDLLSDPDG
SILMFLPQAHVFARAINYGVISSSIQVHIATGISTLLSDLQASRPTIMIGVPRVFEKVYN
AASQKAGHGIKGHIFAAAAHTAQGYMSSISETGKAKPTQSALRTLYTPLVYSALKEALGG
RAKWLVCGGAPLDPQLLSFFRGAGIPVYEGYGMTETSAPCTFNPLGTPFKAGSVGIVFPG
FSIRISEEDEIQIKGEGAFKRYHKNDQATKEAFTDDGWIASGDLGSFSKDGFLYITGRKK
DLIITAGGKNVSPSPIEEAIRRCSLVSQAVVLGDKRPFISALITLDEDSVRSWLEANDLD
KNMPLEEAAENAAVRGEIQKYVNLANEGVSRAESVRKFIVLPEDFSQDNGLLTASMKVIR
PRVIKRYQKLLDTQMYVPRKKAA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggatttttcgatgaggtaaaaacaaaggtgcaggagctgaccgcttccaggaaaaca
agttctgcttcaaatcattcttcttcacctactaatcagcagcagtattttaccagtcag
gaagatcagcctgctcaggacgagaatacttggactgccaactctcagcctatagtccac
tactggtcccgggactaccctaccaccaccggccctgatcccgtcaccgggctgctgacc
agcacaaccgagggcgtgaaaaatatacctgattccactactatttactctctttatgaa
gatagagcccggcggaccggcgatggcccgctcttccactttaaagataatggccgctgg
gttacccgttctgccaaccaggctttggctgacattagggcaacagcaaagggcctgata
catcagggcatgaagaagggagactgtctagcctttatgtgcaggacctcatatgagtgg
gatattatcgacgccgctgttctgtctatcggaggggtcctgtccaccatatacgacacc
gattctgcagctcaaatccgggccatcgttaataattctgatgccaaagttctggttgtg
caaactaaagacatgctagagcgagctgatggagctatagatgactgcaaaagcctgaaa
aaaatttactgcctggaaaatggggccctgcaggaaattcaggcatatggacgggccgtg
tcggacgatgatttggacgaaagaatcaactcagtcaggctagacgacatatgcactatt
gtgtacacttccggttcaacttccgctccgaagggggtggaactgacccagcgtaatttg
gttgcttttgctctcaatatcaatgctttcattccagatcttctgtccgatcccgatgga
tccattctcatgttcctaccccaggcacatgtctttgcccgtgccattaattacggagtt
atctccagttctatccaggtgcacattgccaccggaatcagcacccttctgtcagacctg
caggcctcccgccctaccattatgattggggttccccgcgtctttgaaaaagtctacaat
gctgcttcccagaaggcagggcatggaatcaaagggcatatttttgctgcagcagctcat
actgcccagggctacatgtcttccatctcagaaacaggcaaggctaagcctactcaaagt
gccctccgcaccctttatactcccctggtgtattcagccctcaaggaagccttgggcgga
cgggctaagtggctggtctgcggaggcgcccccctggatcctcagctgctcagcttcttc
cgaggagcgggaatccctgtttacgaaggctacggcatgactgaaacctcagccccctgt
accttcaaccccttgggaacccccttcaaagcaggttctgtaggaattgttttccccggc
ttctccatccgcatcagtgaagaagacgagatacaaatcaaaggtgagggagcctttaaa
cgctaccataagaacgatcaggcgaccaaggaagcctttaccgatgatggctggattgct
tccggcgatttaggctccttcagcaaggacggatttctctacatcaccggcagaaagaag
gatctgatcatcactgccggaggtaaaaatgtatctccctcccctattgaggaagctatc
cgccgttgttctctggtctcccaggctgtagttctgggtgataagaggccctttatttcc
gccctgatcactcttgatgaggacagcgtcaggagctggctcgaagccaatgatctggac
aagaatatgcccctggaagaagcagcagagaacgctgccgtccggggagaaatccaaaag
tatgtaaacctggccaatgaaggagtttcccgggcagagtcggttcgcaaattcatcgtc
ctccccgaagatttcagtcaggacaatggtcttctgaccgcttccatgaaggtcatccgt
ccccgggtgattaagcgctaccagaagctgctcgacacccaaatgtatgttccccgtaag
aaggcagcctag
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