Scardovia inopinata: SCIP_0641
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Entry
SCIP_0641 CDS
T03977
Name
(GenBank) putative ABC transporter ATP-binding and permease components
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sij
Scardovia inopinata
Pathway
sij02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIP_0641
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sij02000
]
SCIP_0641
Transporters [BR:
sij02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIP_0641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
NTPase_1
RsgA_GTPase
AAA_21
MMR_HSR1
DEAD
AAA_30
AAA_23
AAA_14
AAA_16
TsaE
AAA_28
nSTAND3
AAA_25
DUF87
DO-GTPase2
AAA_29
cobW
NACHT
NB-ARC
AAA_19
ATP_bind_1
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAR06708
LinkDB
All DBs
Position
805375..807312
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AA seq
645 aa
AA seq
DB search
MSHQQSSPQITGSRRHTLSRLIRYLLADKVRFIGMILAGIVGVGLIVYAPKVLAKATNLL
FTGVLDVLLTRMGVPQGMSTGQIQKLLQSRGQGKFASLISQYDIHVGQGIDWTALAWVLA
GVVGIYLLSILFRLVQNFLMTRVVADSVYVMRRQIETKINSLPLRYFDRVPRGEVMSRTT
NDMDNISGSLQQILGEFFFSSFQFIGTVIMMLSVSPLLTVIALAVVPFLLATVAVILRIT
QPQFVIQWQKTGQVNSHVEEMFSGHMVVRAYGQQEKAKEEFEEYNKGLYESSFKATFVSG
LMNPATGFFGNLSFVLVVIFGGIRVINGNLSLGDLQAFSQYSRQISQPLGQIASMASMLQ
SALASTSRIFEFLDEEEAEKEDPSTPSLIERTGGPIQGHVRFDNVSFSYDPRNPLIGNLS
LEALPGQTVAIVGPTGAGKTTLVNLLMRFYEVDQGEITIDGIKTREITRQNLRSHFGMVL
QDTWLFDGTIRDNLFYGVHDPSLRTDDRLLEAARATHVDEFVRKLPQGYETVLTEDSSEL
SLGERQLLTICRALLSNPDILILDEATSSVDTRTEVKVQNAMSALRVGRTSFVIAHRLST
IRDADLILVVNHGSIIEQGNHEQLLAAGGAYAALYNSQFTQGQEE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcagcaatcatcaccgcaaataaccggcagccgtcggcacaccctgtcccgc
ttgatccgctaccttctggctgataaggttcgttttataggcatgattctggctggtatc
gtgggtgtaggactgatcgtgtatgcacccaaggttttggccaaggcaactaatcttctc
tttacaggagttctggacgttcttctcacccggatgggggtgcctcaggggatgagtacc
ggccagattcagaaactgcttcagtcccgcggtcaggggaaatttgcttccctcatttcc
cagtacgatattcatgttggccagggcattgactggacagccttagcctgggttctggcc
ggagtagtgggcatttatctcctgtcaatccttttccgcctggtccagaatttccttatg
accagggtggtggccgacagtgtctatgtaatgcgcaggcagattgaaaccaagataaat
tccctgcccttacgctactttgaccgggttccccgcggggaggttatgagccggaccacg
aacgacatggataacatttctggcagtctacagcagatcctgggtgaattcttcttctcc
agcttccaatttatcggtactgtcatcatgatgctgtctgtttctcctctgctgactgtg
atagctctggctgtagttcccttcctactggcgactgtggctgttattcttcgcattacc
cagcctcagtttgttattcaatggcaaaaaaccggacaggttaattcccatgttgaggaa
atgttctctggtcatatggttgttcgtgcatacggacagcaggagaaagccaaggaagag
tttgaagaatacaacaagggactatatgagtccagctttaaggcaacttttgtttccggc
cttatgaatcctgctaccggtttcttcggcaacctttcctttgttttagtggtcattttt
ggcggaattagggtgatcaacgggaatctcagcttgggcgatcttcaggccttctctcag
tactcccgccaaatttcccagcccctggggcagattgcttccatggcctccatgctccag
tcagctttggccagtacctcccggattttcgaattcctggatgaagaagaggcagaaaaa
gaagatccttctactcccagcttgatcgaacggacaggcggtcctatccagggtcatgtc
cgctttgacaatgtttctttctcttacgatcccaggaatccgctgattggtaatctgagt
ctggaagcattaccaggtcagactgtggcaatcgtagggccaactggagccggcaagacg
accttggttaatcttctcatgcgcttctatgaagttgatcagggagagattactattgac
ggaatcaagaccagggagatcacccgccagaatctgcgttctcattttggtatggtcctc
caggatacctggctctttgacgggacaatcagagataatctcttctacggagttcatgac
ccttctttgagaacagatgaccgtttacttgaggccgccagggctactcatgtggatgaa
ttcgtccgtaaactgcctcaaggctatgagactgtgctaacggaagacagttcggaactg
agcttgggggagaggcaactcctgaccatctgccgagccctcctgtcgaaccctgacatt
cttattctggatgaagccaccagctcagtggacacgaggacagaggtcaaggtccagaat
gccatgagtgccctgagagtagggcggaccagttttgtcattgctcatcgcctgtctacc
attcgggatgccgatctgattttggtagtcaatcatggatccatcattgagcagggtaat
catgagcagctcctagctgctggcggtgcttatgctgccttgtataattctcagttcact
caggggcaagaagagtga
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