Scardovia inopinata: SCIP_0676
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Entry
SCIP_0676 CDS
T03977
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sij
Scardovia inopinata
Pathway
sij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCIP_0676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sij03400
]
SCIP_0676
Enzymes [BR:
sij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCIP_0676
DNA repair and recombination proteins [BR:
sij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCIP_0676
RecFOR pathway proteins
SCIP_0676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_14
AAA_22
Mg_chelatase
nSTAND3
AAA_3
Zeta_toxin
Sigma54_activ_2
AAA_25
AAA_18
TsaE
RNA_helicase
NTPase_1
AAA_33
IstB_IS21
AAA_17
AAA_19
NPHP3_N
NACHT
ABC_tran
NB-ARC
Rad17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAR06743
LinkDB
All DBs
Position
850135..851238
Genome browser
AA seq
367 aa
AA seq
DB search
MTEPSSFSASDYKEQGLDPILNKDAHEESLRIISADPDADDSISDEELRPSTLETFIGQP
QLKAQLGLFLNAARKRQVPPDHILLAGPPGLGKTTLAMIVAHELDVPIRVTSGPAIQHAG
DLASILSSLDEGEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRF
TVVGATTREGMLPSPLRARFGFTAHLDYYPTSELERLIKRSSSVLDLTVDDQAAHELAVR
SRGTPRVANRLLRRVRDWGIVHDLPTIDADSVIDALELYQIDKEGLDRLDIAVLTALCKQ
FHGGPVGLNNLAAMVGEEAETVETVCEPYLVREGFLIRTPRGRAATERAWRHLGLSPEKE
DDVTRLF
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccatcatcattttcagcatcggactataaggaacagggcttagatcctatt
ctcaacaaggatgctcatgaagagtccctccgcattatttccgcagatccagatgccgat
gattccatcagtgatgaggaactacggccctcgactctggagacttttattggccagccg
cagctgaaggcacaattgggcctctttttgaatgcggctcgtaagcgtcaggtgcctcct
gatcatattctcctggccggtcctcccggactggggaagactaccctagccatgatcgtg
gctcacgagcttgatgttcccatcagggtgacttcagggccggcaattcagcatgctggt
gatctcgcatctatacttagctccctcgatgaaggagaagttctcttcatagacgaaatt
caccgtttgccacgggcagcagaagagcttctctacatagccatggaagattttcgggtt
gatgttatggttggcaaggggccgggcgcttcgtccatacccttgactcttccccgtttt
accgtcgtgggggcaacgaccagggaaggcatgcttccctcgccgctcagagcccgtttt
ggcttcactgcccacctggattattatcctacatccgaactggaacgcttgatcaagcga
tcttcctctgtccttgatttaactgtcgatgatcaggctgctcatgaacttgctgtacgt
tcgcggggaacaccacgagtagctaatcgtttgctgaggcgggtgcgggactggggtatt
gttcacgatcttcctaccatagatgctgattccgtaattgatgctctggaactttaccag
atcgataaggagggactggatcggctcgatattgcagttctgactgccttatgcaaacag
tttcatggaggtcccgttggccttaataatctggcagcgatggtgggggaggaggctgaa
accgtagagacagtctgtgaaccttatttggtcagggaaggattcctgattcgtactccc
agggggagggcagctacagaacgggcctggcggcacctgggcctcagtccggagaaagaa
gatgatgtcaccaggctgttttag
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