Scardovia inopinata: SCIP_0723
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Entry
SCIP_0723 CDS
T03977
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sij
Scardovia inopinata
Pathway
sij00061
Fatty acid biosynthesis
sij00071
Fatty acid degradation
sij01100
Metabolic pathways
sij01212
Fatty acid metabolism
sij02024
Quorum sensing
Module
sij_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SCIP_0723
00071 Fatty acid degradation
SCIP_0723
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCIP_0723
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sij01004
]
SCIP_0723
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sij04147
]
SCIP_0723
Enzymes [BR:
sij01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SCIP_0723
Lipid biosynthesis proteins [BR:
sij01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
SCIP_0723
Exosome [BR:
sij04147
]
Exosomal proteins
Exosomal proteins of breast milk
SCIP_0723
Exosomal proteins of breast cancer cells
SCIP_0723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
DUF6218
Motif
Other DBs
NCBI-ProteinID:
BAR06790
LinkDB
All DBs
Position
complement(904770..906620)
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AA seq
616 aa
AA seq
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MLKEYEHPLTKPIDSDKNIFSLLDTRATERPDDDLIGYKGDDGQWAYFKADQFRSMVIMI
AKGLLAKGIKKGDSIAILARTRWEWTCLDNAILSIGAVVVPIYETDSPAQIKHIVNDSAV
KFLIAENDEQLHKIDSIADECPTLEETFVMDSDGGSDSVIDIFNEFGHNKTDADFWEAEK
AVRGSDLASIVYTSGSTGVPKGIELTHSNFVFVALSGDQTMPDIGHVPGGSRLLLFLPLT
HVFARYMQFFSFCSPMTLGLSHNFKTVITDFRDFQPTFILSVPRIFEKVYNAASQRAGRG
IKGKVFRNSVKLARQWSYAQQEGKKLPLPERIMYSIYNNLVYKQILEVFGGRVRNAVSGG
APLDADITHFFNGIGMPILEGYGMTETCAPVSVNPTEGYKIGTVGPTLEGIDVGITEEGE
ICLKGPNICRAYHNNPELTKQQIIDGWLHTGDLGQVDDDGFITITGRKKDMIITAGGKNV
SPEILEAAVMSSPVVDHCVLVGDKKPFVSALITLNLVDANQWLKGQGAAPETSLEEAVAN
PIIRAEVKRVVDKANAQVSRAESIRKYLILPDTISQENGMLTASLKIRRKAITDHYQHLI
DTEIYGPRTGKKKTKR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggagtacgaacaccctctgactaaacccatagatagtgataaaaatatcttt
tctctcttggataccagagctactgaacgtccagatgatgacctgatagggtacaagggt
gatgatgggcaatgggcctattttaaggctgatcagttccgttcgatggttattatgatt
gctaagggattactggcaaaggggataaagaagggagactccattgccatcctggcaaga
acccggtgggaatggacctgcttagataatgccattctcagcattggagctgtggtggtt
cctatatatgaaacagattcaccagcacaaattaagcatattgttaatgactctgctgtg
aagtttctcattgcagagaatgatgagcagcttcataagattgattccattgccgatgaa
tgtcctactctggaagagacctttgtcatggattccgacggaggatcggattctgtcatc
gatattttcaacgaatttggtcacaataaaacagatgctgatttttgggaagcggaaaag
gctgtccgtggtagcgatctggcttccattgtttacacatctggatctaccggagttcct
aaaggaattgagctgacccattccaactttgtcttcgttgccttgtccggagatcaaacc
atgcctgatattggtcatgtcccgggaggatccagactcttgcttttcctgccactgact
catgtatttgctaggtacatgcagttcttcagtttttgctctccaatgactctcggcctg
tctcataattttaagactgttatcactgatttcagggacttccagccaacttttattctt
tctgttccccgcatcttcgaaaaagtttataatgctgcctctcagcgagctggacgggga
atcaaggggaaagttttccgaaattctgtcaagcttgcccgccagtggtcctatgcgcag
caggaagggaaaaaactccctcttcctgaacgaatcatgtattctatttacaacaacctg
gtctacaagcagattctggaagtattcggtggccgggtaaggaatgctgtgtcaggagga
gcccctctggacgccgatattacccatttcttcaatgggatcggcatgcctattctggag
ggctacggaatgactgagacctgcgcgccggtgagtgttaaccccactgagggctacaag
attggcacggttggaccgaccctggagggaatcgatgttgggattaccgaagaaggtgaa
atctgtctgaagggaccgaatatttgccgggcctaccacaataatcctgaactgacaaag
cagcaaatcatagatggctggctgcataccggtgatctaggtcaggttgacgatgacgga
tttattactatcaccggccgcaagaaggacatgattattaccgccggaggaaagaatgta
tctccggaaatcctagaagctgccgttatgtcttcaccagtggttgatcattgtgttctg
gtgggagataaaaagccttttgtttctgctctgatcacccttaacttagttgatgctaac
cagtggttgaaggggcagggagccgctcctgaaaccagcttggaagaagctgtagccaat
cccattatccgagccgaggtcaagcgggtggtcgataaggccaatgcacaagtttcacgg
gcagagtcaatccgtaaatatctgattcttcctgatactatctcccaagaaaacgggatg
ctgacagccagtttgaagattcgccgcaaggcgatcaccgatcattatcagcatctgatt
gatacagaaatctatggccccaggacgggaaagaaaaagacaaagcgctga
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