Scardovia inopinata: SCIP_0758
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Entry
SCIP_0758 CDS
T03977
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sij03032
]
SCIP_0758
03400 DNA repair and recombination proteins [BR:
sij03400
]
SCIP_0758
Enzymes [BR:
sij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCIP_0758
DNA replication proteins [BR:
sij03032
]
Prokaryotic type
DNA Topoisomerases
SCIP_0758
DNA repair and recombination proteins [BR:
sij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCIP_0758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BAR06825
LinkDB
All DBs
Position
complement(950703..953021)
Genome browser
AA seq
772 aa
AA seq
DB search
MSAAKKKSEAYNANSLSVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGA
CSHIVVTLHKDGSITVADNGRGIPVDIEQKTGLSGVEVVLTKLHAGGKFGNSAYTAVGGL
HGVGSSVVNALSSRLDVEVDRGGKTYRMEFHQGHPGVYDDPDPQNPSPDSPFARTRKGRP
TELRVVGTYSGKKTGTRIRYWADPEIFNSTARFNYDQLIDRVRQTSFLVPGLRIEVIDEN
ISENTYVASVDADAQREFENSSARETKPEKQLDSLDSLDSSAASSPSSLESSAEGQVSAD
PVAIESSTMPHPRVEEFFHEGGVVDFVDYLSHGEPISSIWHIEGDNTYEEETQQVGPDGD
LHPAMVTRDCHVDIALRWINDYETVLRSFVNVVETPGGGMHVDGFLNSITRNIRRSVEAN
ARKLKVNLKDSSMKIERDDVLAGIVAVVTVRIAEPQFQGQTKDVLGTAQVKPIVAKMCDD
QFGQMITGSKRGFKDQSARVLEKITGEMHARVQARKTKEVTRRKNALESASMPAKLSDCQ
PGNDDIAELFIVEGDSALGTAKAARNSSFQALLPIRGKILNVQKASVAQILANKECSAII
QVVGAGSGATFDLSQSRYDKVIMMTDADVDGAHIRTLLLTLFYRYMRPLVQAGHVYAAVP
PLHRIALMGKHKGEYVYTYSEEELARKLSQLDRQEIRYDPDIQRYKGLGEMDADQLADTT
MDPRSRMLRRIRLEDAQKASEIFELLMGDEVPPRRQFIIDNADDFDRTAIDA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgctgcgaagaaaaaatctgaagcttataatgctaacagtctgtccgttctggag
ggtcttgatgccgtccgtaagagaccaggcatgtatattggaactacagacagccagggt
cttatgcactgcttgtgggaaattatcgataattcggtagatgaagccctggctggagct
tgcagccatattgtagtgacccttcataaagacggatctattactgttgccgataatggc
cgtgggattccggttgatattgagcagaaaacaggtctgtccggcgtggaagttgtttta
accaaactccatgcaggcggtaaatttggcaattctgcttacactgcggttggcggtctt
catggagtgggatcgtccgttgttaatgccctcagctcccgcttagatgttgaggttgac
aggggcggaaaaacatatcgaatggaattccatcagggacatcctggggtttatgatgac
cctgacccacagaatccgtctcccgattcaccttttgcgcgaacccgcaaggggaggccg
acagagctgagggtagtaggcacatattccggtaagaagaccggtacccgcatccggtat
tgggctgatccggaaatttttaacagtacagctcgcttcaactatgatcagctgatagac
agggtaaggcagacctctttcctggtgcctggcttgcggattgaagtcatcgatgaaaat
atatcagagaacacatatgtggcttcagtcgatgcagatgctcagcgtgagtttgagaac
tcgtctgctcgggagacaaagccggaaaaacagctggatagcttggatagcttggatagc
tctgcggccagttcccccagttctctggaatcatctgcggaaggccaggtaagcgcggat
cctgttgctatcgagtcttccacgatgccgcatcctcgggtagaagaattcttccacgag
ggcggggtggttgattttgtggactatctgtcgcatggggagccgattagcagtatttgg
catatcgaaggcgataatacctatgaggaagaaactcagcaggtgggaccagatggagat
ctgcatcctgcgatggtaaccagagactgccatgttgacattgccctgcggtggatcaac
gattatgagactgttttgcgcagctttgtcaacgtagtagagacgcccggcggaggcatg
catgtggatggcttcctgaattcgatcaccaggaacatccgccggagtgttgaagccaat
gcccgcaagctgaaggtgaatctgaaagattcgtccatgaaaattgagcgggatgatgtt
ttggccggaattgtcgctgtggttactgttcgaattgctgaaccccagttccaggggcag
actaaagatgtcctgggaacggcccaggttaagcctatcgtggccaagatgtgtgatgat
caatttggtcaaatgattacgggatctaaacgcggtttcaaagatcagtcagcccgggtt
ttggaaaaaattaccggagagatgcatgctcgtgttcaggcaaggaaaaccaaggaagtt
accagacggaagaatgccctggaatcagcctctatgcctgccaaactgtctgactgccag
cctgggaatgacgacatagccgagctctttattgtagagggtgactctgccctggggaca
gcgaaagcagcccgaaactccagcttccaggccctgctgcctatccgggggaaaatcctc
aatgttcaaaaagcctctgttgcccagattctggcgaataaagagtgttcagccattatc
caagtggtaggtgccggttccggggctacttttgatctgagtcagtcccgctacgacaag
gtcattatgatgaccgatgctgacgtggacggagcgcatattcgtaccctcctccttacc
ctgttttaccgctatatgcggcctctggtccaggccgggcatgtgtatgcagcagtgcct
cccttgcaccggatagccttgatgggaaagcataaaggcgaatatgtgtatacttattcc
gaggaagagctggccagaaaattatctcagcttgacaggcaggagatacggtacgaccct
gatattcagcgctacaagggtttaggtgaaatggatgctgatcagctggctgacaccacc
atggatccccgttcccggatgctgaggcggatccgtctggaggatgcccagaaggcttcg
gagatttttgaacttctgatgggtgatgaggttcctccccgccggcaattcattattgat
aatgccgatgattttgacagaactgctatagatgcctga
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