Scardovia inopinata: SCIP_0780
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Entry
SCIP_0780 CDS
T03977
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sij03016
]
SCIP_0780
Enzymes [BR:
sij01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
SCIP_0780
Transfer RNA biogenesis [BR:
sij03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
SCIP_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
Ribosomal_S14
Motif
Other DBs
NCBI-ProteinID:
BAR06847
LinkDB
All DBs
Position
complement(977959..979425)
Genome browser
AA seq
488 aa
AA seq
DB search
MNEDMMTAEEKQNLADKDESQLSRDCQETGRGRGVYYVHTLGCQMNVHDSERIAGVLEAD
GYVKATRRQIENNDLDLIVMNTCAVRENASNRMYGTLGQWAELKRERPGLQIAVGGCMAQ
KDRRRIVQRAPWVDAVFGTKNIGSLTGLLKKARLENRSQVQVATDLDYFPSQLPAARASR
VSSWVAISVGCNNTCTFCIVPSVRGKERDRRPGDILDEIQRCVDAGAKEITLLGQNVNSY
GYSTGDRYAFSKLLRACGKIDGLKRVRFTSPHPAAFTDDVIEAMAETDNVMHQLHMPLQS
GSDRILRAMRRSYRVSRFKGIIDKVRAAMPDAQITTDIIVGFPGETEDDFQQTMDLLRQI
RFSSAYTFEYSPRPGTPAALMEQIPPEVMRDRYTRLHDMQETITAQEMQKFLGRTVEVLV
TGQGRKDSNTHRVTGRERTGALVHIGVPAGQEIPQTGDFVDCTVTDSSRHYLLADPQPEA
GQVYKVHH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacatgatgacagcagaagaaaagcagaatctggcagacaaagacgaaagc
cagctttcgcgggattgtcaggaaaccggccgcggcaggggagtatattatgtgcatacc
cttggctgtcagatgaatgttcacgattctgaacggattgcgggcgttctggaagctgat
ggatatgtgaaagccaccaggcggcagatcgagaataatgatcttgatctaattgttatg
aatacttgtgctgttagagagaacgcatccaaccgcatgtacgggaccttaggccagtgg
gcagagctaaaaagggaacgccccggcctgcagattgctgtgggtggctgcatggcccag
aaagacaggcgtaggattgtgcagagagccccttgggttgatgctgtctttgggacaaag
aacattggctcattgaccggtttactgaagaaagctcgtttggagaatcgcagccaggtc
caggtggcaaccgatctggattatttccccagccagctgccggccgccagggcttcccga
gtttcctcctgggtcgcgatttctgtaggatgcaataacacctgcacgttttgcattgtt
ccctcggtcaggggtaaggaaagggaccgacgccctggtgacatcttagatgaaattcag
cgctgtgtagatgccggggccaaggaaattaccttactggggcagaacgttaattcttat
gggtattcgactggagatcgctatgctttttctaagctcttgcgtgcctgtggaaaaatt
gatggtttgaaaagggttcgttttacttctccgcacccggctgccttcacggatgatgta
attgaagccatggcagaaaccgataatgtgatgcatcagctccatatgcctttgcagtca
gggtctgaccgaattcttagggctatgcggcgttcctacagggtttcgcggttcaaagga
attatagataaggtgagggctgccatgcctgatgcgcagattacaaccgatatcattgtg
ggattcccgggagaaacagaagatgatttccagcagaccatggatctgctcaggcaaatc
cgtttttccagtgcctatacttttgagtattctcccaggccgggcactcccgctgctttg
atggagcaaattcctcctgaagttatgcgcgataggtataccaggctgcatgatatgcag
gaaacgattactgctcaggaaatgcagaagttccttggacgcacagtcgaggttctggtg
acagggcagggacgaaaagattccaatactcacagggttaccggccgggaaaggacaggt
gctctggttcatattggagtccccgctggtcaggaaattcctcagaccggagatttcgtt
gactgcacagtgacggattcctccagacactatcttttggcagacccccagccagaagcc
ggccaggtttacaaggttcaccattaa
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