Scardovia inopinata: SCIP_0862
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Entry
SCIP_0862 CDS
T03977
Name
(GenBank) putative DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sij
Scardovia inopinata
Pathway
sij03030
DNA replication
sij03430
Mismatch repair
sij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCIP_0862
03430 Mismatch repair
SCIP_0862
03440 Homologous recombination
SCIP_0862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sij03032
]
SCIP_0862
03400 DNA repair and recombination proteins [BR:
sij03400
]
SCIP_0862
Enzymes [BR:
sij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCIP_0862
DNA replication proteins [BR:
sij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCIP_0862
DNA repair and recombination proteins [BR:
sij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCIP_0862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAR06929
LinkDB
All DBs
Position
1076925..1077773
Genome browser
AA seq
282 aa
AA seq
DB search
MEITIAEVLDSLPAQSLDTPLKESFLLGFDTETTGTRAGKDAIVSASLVLRNPALGFNGD
STQDWIINPGIPMNPRASQVNGFTDDYLREHGANQADSIALIANSIIKAQIRNIPLLAYN
APFDITMLNGDLQKLGQETLAGQLLVADQTGNDSSWSSKSDSESNSNSEDEQEKNKKREL
LIVDPLVIDRALSHRSGKRTLTDTTYYYGVQPHGSFHDATADTIAAVDLIAPISEAYPQA
GDLPVGQLMDWQRRAHQAWKKQFNDYLLSRGRKPVTDSWFPR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacgattgctgaagtacttgattctcttccggcacaaagcctggatactccc
ctgaaggagtccttcctcctcggatttgacacggagacaaccggaacccgggcaggcaaa
gacgccattgtctcagccagtctggttctgcgcaatccagccctgggatttaacggagat
tctacccaggattggattatcaacccgggtattcctatgaatcccagagcaagccaggtc
aatggttttaccgatgattatctgagagagcatggagcaaaccaggctgattctattgcc
cttattgccaacagtattattaaagcacaaatccgcaatatccctcttcttgcctacaat
gcccccttcgacatcaccatgcttaatggagatctgcagaagcttggccaggaaactctg
gctggtcagctcctggtagctgatcagaccggcaatgactccagctggagctctaagagt
gactccgagagtaactccaatagtgaggacgagcaggaaaagaacaaaaagcgggaactc
ttgattgtcgatcccctggttattgatcgggctctgtcccaccgatcaggaaaacgaacc
ctgacggatacaacttactattatggggttcaaccccacggatccttccacgatgccacg
gcggacactattgctgctgttgatttgattgcccccatcagtgaagcctatccacaggct
ggcgatcttcccgttggtcagcttatggactggcagcggcgggctcaccaggcctggaag
aagcagttcaacgattatctgctctccaggggccggaaaccggttaccgattcctggttc
cccagataa
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