Scardovia inopinata: SCIP_0876
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Entry
SCIP_0876 CDS
T03977
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sij
Scardovia inopinata
Pathway
sij00470
D-Amino acid metabolism
sij00550
Peptidoglycan biosynthesis
sij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCIP_0876
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCIP_0876
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sij01011
]
SCIP_0876
Enzymes [BR:
sij01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SCIP_0876
Peptidoglycan biosynthesis and degradation proteins [BR:
sij01011
]
Precursor biosynthesis
Amino acid ligase
SCIP_0876
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
BAR06943
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All DBs
Position
complement(1098586..1100157)
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AA seq
523 aa
AA seq
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MMADKRTRQIHRIIADSLSGRTTIMIAGLGLGGSSVEAILKQRSAQIVTVDDKKAASYTF
AQVMADDFDWEPVSLVVTSPGFSPHSDFLTRVAARGIPIISEVEFAWQIRARNPISGQPA
AWIGITGTNGKTSTTEMTAEILQAASLAAPAVGNIGVPVSQAAVDENNQALVVELSSFQL
HYTYSLQLEAAAITNLADDHLDWHGGFENYVADKARVYQHVKKALVYNADDPRVSQLARQ
ARQAQLAQPAQLAQQAQSDSTCLQVGFTLGQPADGQVGIDQGWIVSRTPLIPQGRLAALT
DFPHLTEPDGTVYPHLLADALCALCLSAGYGVPAQTALSALQGFAPGGHRIQKVAVYHKH
SANPDSANSPSSGDIRFIDDSKATNAHAAAASLSSFPDQSVIWIAGGLSKGAHFDDLVAK
QKKVIKAAVIIGQDQSQILHSLHSQAPDIPYTCIDPGHKNSIMKEAVAAAVSYAQPGNVV
LLAPACASMDQFASYADRGDQFASCAQTWVAHQQEVENFHDQD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgataaacgtactaggcagattcacaggattatagctgacagtctctctggc
aggacaacgattatgattgctggtcttggccttggaggttccagtgtggaggctatcctc
aaacagagatcagctcagatagttaccgtagacgacaaaaaagcagcctcatacaccttt
gcccaggttatggctgatgattttgactgggagccagtttccctggtggtgacgtctcct
ggattttctccccacagcgactttctgaccagggtcgctgcccgagggattcctatcatt
tcggaggtggagttcgcctggcagatcagggctcgcaacccgatatccggccaacccgcg
gcctggattggaattaccggtaccaacggaaaaacatctacgactgaaatgactgcagaa
attctgcaggctgcatcgttggcagcccctgccgtgggcaatatcggggttcctgtctcc
caggctgctgtcgatgaaaataatcaggccctggttgtagaactcagctcctttcagctc
cactatacgtacagcctgcagctggaggcggcagccataactaatctggcagatgatcat
ctggattggcatggtggttttgaaaattatgtagctgataaggcgagagtgtaccaacat
gttaaaaaagctctggtctataatgccgatgatccccgggtaagccagcttgcccggcaa
gcccggcaggctcagcttgctcaacctgctcagcttgctcagcaggcgcaatctgattct
acctgtcttcaggttggatttactctcgggcagccggctgacggccaggtgggaattgat
caggggtggattgtatcccgcacccctcttattcctcagggccgcctggcagctctaact
gattttccgcatctgaccgaacctgatgggactgtctatccccatctgctggctgatgcc
ctctgtgccctctgcctgtcagccggttatggtgttccggcccagacagccctgtctgcc
cttcaaggttttgcaccaggagggcataggatacaaaaggtggcagtctatcacaagcac
tctgccaaccctgattctgcgaattccccatcttccggtgacatccgattcattgacgat
tccaaggctacgaatgcccatgctgccgcagcatccctgagcagttttcccgatcaatcc
gtgatttggattgccggaggcctgtctaaaggtgcacattttgatgatctggtagccaaa
caaaaaaaggttatcaaggctgcagtgattattgggcaggatcagtcgcagattcttcat
tccttacacagtcaggcaccggatattccctatacctgtattgatcctggtcacaagaac
tccattatgaaagaagctgtggctgctgctgtttcctacgcccaaccgggcaacgtggtc
ttactggctccagcctgtgcatcgatggatcaatttgcttcctatgctgaccgcggggat
cagtttgcctcctgcgctcaaacttgggtcgcccaccagcaggaggttgagaatttccat
gaccaggactga
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