Scardovia inopinata: SCIP_0878
Help
Entry
SCIP_0878 CDS
T03977
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sij
Scardovia inopinata
Pathway
sij00300
Lysine biosynthesis
sij00550
Peptidoglycan biosynthesis
sij01100
Metabolic pathways
sij01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCIP_0878
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCIP_0878
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCIP_0878
Enzymes [BR:
sij01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SCIP_0878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BAR06945
LinkDB
All DBs
Position
complement(1101330..1102904)
Genome browser
AA seq
524 aa
AA seq
DB search
MIALSVFQAAQILSATLVSSPSDSSQAGDRSDSSTKITSVVTDSRQVSEGSLFVAIKGER
VDGHDYVNQAARAGACAALVEHPVEGAVLPQLVVTDTIGSLGRLARYNISRRRQIALAEG
KDFTVVGITGSVGKTTTKDLVKDLLQTAGTTIAPVGSFNNEIGLPLTAVKVDETTRYFVA
EMGASAAGEIAYLTRLVPPDIAVELKVGAAHLGGFGSVDGIRQAKSELVQALTSQGIAVL
NAQDPNIRLMTGSTHASTLVWFSDGRIDPQNLPGDSRKQIFIYATDTRQDQEDHPSFTLH
LPDLPGIPVTLGLSGVHNVMNALAAVSVAYCLGVRPQTIASVLFNHKAMSPHRMAVSLVT
LTAGESFTLIDDSFNANPDSMKAGLDALSGWKSAESGNEPVKIAVLGSMLELGPREEDLH
HSLGAYAAQSADYVVTVGSETDDHLDTLASALCQGACQRAEQSPVRLLKAYEEHSAGQAA
TRVAQLARQNPGSVVLLKGSHASGLQTLANMWSQSDKINGEVES
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgattgccctgtcagtcttccaggcagctcagatactttctgccactcttgtatccagt
ccgtccgattcatcgcaggcaggagacagaagcgacagttcaaccaagattacttctgtt
gttaccgattcccgtcaggtgtctgaagggagcctttttgttgccatcaagggagagcgg
gtagatgggcatgattatgtgaatcaggctgcccgggctggggcttgcgcagctctggtg
gagcaccctgtagagggggcagtccttcctcagctggtggtgaccgatacgatcggatct
ttgggcagacttgcccgatacaacatcagccgccgccgtcaaattgccctggcagaaggg
aaagattttactgtagtgggcattaccggttctgtgggtaaaacaactaccaaggatttg
gtcaaagatcttctgcagaccgcgggaacaaccattgctcctgtgggatctttcaacaat
gaaattggtcttcccctcaccgctgtgaaggtagatgaaactacccgctactttgttgcc
gaaatgggcgcgtctgcggcgggggagatcgcttacctgaccaggctggttcctcccgat
atagctgtggagcttaaggttggcgcagctcacctgggcggttttggatcagttgatggg
atccgtcaggcaaaaagcgagcttgttcaggctctgacttcccagggaattgctgtgctc
aatgctcaggatcccaatattcgtctgatgactggatctacccacgcgtccactttggta
tggttttccgatggcaggattgatccccaaaatttgcccggtgactctcgaaaacagatt
tttatttatgcgaccgatacccgtcaggatcaggaggatcacccttcttttacccttcac
ctgcctgatcttcccggcattcccgttacgttaggcttgtcaggagttcataatgtgatg
aatgccttggcggcagtcagcgttgcctattgccttggtgttcgtccgcagactattgct
tctgtgctgtttaatcacaaggctatgagcccgcaccgtatggcggtcagtctggttacg
ctcacagcaggggagagttttactttgattgatgattcttttaatgctaatccagactct
atgaaggccggcctggatgctttgagcggctggaaatctgctgaatctggcaatgaaccg
gtaaagattgccgttctgggatccatgttggaattgggacctcgggaagaagatcttcac
cattctctgggagcatatgcggcccagtctgctgattatgtggtaacagtgggcagcgaa
acagacgaccatctggatactttggcatcagcactttgtcagggggcttgccagagggcg
gagcaatcgcctgttcgcctgctgaaggcctatgaggagcattcagccgggcaggcagca
acacgggtagctcagctggccaggcaaaatccgggaagtgtggttcttctcaaaggctct
catgcctccggcctgcaaacattagcgaatatgtggtcacagtcagacaagatcaacggg
gaagtggaatcatga
DBGET
integrated database retrieval system
