Scardovia inopinata: SCIP_0956
Help
Entry
SCIP_0956 CDS
T03977
Name
(GenBank) conserved hypothetical protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sij03009
]
SCIP_0956
Enzymes [BR:
sij01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
SCIP_0956
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
SCIP_0956
Ribosome biogenesis [BR:
sij03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SCIP_0956
23S rRNA modification factors
SCIP_0956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BAR07023
LinkDB
All DBs
Position
complement(1208964..1209794)
Genome browser
AA seq
276 aa
AA seq
DB search
MRIDKALVSRGLCPSRTRAQRLLEAGLVLLNGHVCTKPSQTVEDKDQISLHQAVREGHSS
LTYVSRAAAKLMGAYEAFATQGLADPSGQLCLDIGASTGGFTQVLLEKGGKKVIALDVGH
DQLDPLLAADPRVIPMNGVNFREVKPEDLPFLPSYAVSDVSFISLSFIIPPLAQIARAFL
EHSQPGPDKNRQIFTAILLIKPQFEVGKGKLGKGGIVRSDSLRKAAVTKILSSAQDEGFE
IRGLAPSPVEGSHGNQEYLMWITVDNMPDNQRKFNT
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatagacaaagccctggttagtcgtggattatgtccttccaggactcgtgcccag
cggctgcttgaagccgggctggtcctgctcaatggtcatgtttgtactaagccatcccag
accgtggaagacaaggatcagatcagcctgcatcaagcagtccgggaagggcattcttcc
ctgacttatgtttcccgggcggcagcaaagcttatgggggcgtatgaagcttttgccacg
caaggacttgccgatcccagcggtcagctctgcctggatattggtgcttcaaccggcggc
tttacccaagtgctgctggaaaagggagggaagaaagtaatagctttggatgtaggacat
gaccaattggatcccctgcttgcagccgatcccagggttattcctatgaatggggtgaat
tttcgggaggtaaagccggaagatttaccttttctgccctcatatgcagtttctgatgta
tctttcatctccctctcttttattattccgcctttagcgcagatagcacgggcttttctc
gagcacagtcagcccggtcccgataaaaacaggcagatttttactgctattcttctgatt
aaaccccaatttgaagtggggaaggggaagttaggaaaaggagggattgtccggtcagat
tctttgaggaaggcggctgtgaccaaaattctgtcttccgcgcaggatgaaggatttgag
attcgtggcctagccccttctcctgtggagggctctcatggtaatcaggaatatcttatg
tggataactgtggataacatgccggataatcagagaaaatttaatacctga
DBGET
integrated database retrieval system
