Scardovia inopinata: SCIP_1003
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Entry
SCIP_1003 CDS
T03977
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sij
Scardovia inopinata
Pathway
sij03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCIP_1003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sij03400
]
SCIP_1003
Enzymes [BR:
sij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SCIP_1003
DNA repair and recombination proteins [BR:
sij03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCIP_1003
Prokaryotic type
SCIP_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAR07070
LinkDB
All DBs
Position
1271739..1272461
Genome browser
AA seq
240 aa
AA seq
DB search
MYDGSMTTSAVRKPLDQIMDPAWAEGLKPVEPQIRAMGDFLRQEHAQGHPTLPSSNNIFR
AFQLPLAQVKVLIVGQDPYPTPGHPVGLSFCVAPDVDPLPGSLRNIYKELVDDMQVPQPS
NGDLTPWVDQGVMLLNRSLTVRAGAPNSHQGKGWEQITEQAIRVLNNRLDQDGKPLPLVA
ILWGRNAQSLEPLLTHAAIIKSAHPSPLSANRGFFGSRPFSRTNAYLEQMGAKPVRWDLP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatggttctatgactacttcagcagtgcgcaaacccctcgaccaaatcatggat
cctgcctgggcagaaggactgaaaccagtagagccacagattagggctatgggagacttt
ctgcggcaggagcatgcccagggacatcccaccctgccttccagtaataatatttttcgg
gctttccagctccccctggcccaggtcaaggtccttattgtgggtcaggatccttaccct
actccgggccatcctgtaggactcagcttctgcgtagccccagatgtggatcccctgccc
ggcagcctgcgaaacatatataaagagctggtcgacgatatgcaggttccccagccctca
aacggtgatctgactccctgggtagatcagggggttatgcttctaaacaggtccctgact
gttcgggcaggagctcccaatagtcatcaaggaaagggatgggagcagataaccgagcag
gctatccgggtccttaacaaccggcttgatcaggatggaaaaccgctccctctggtagca
attctctgggggcgtaacgcccagtctctggagcccttgctcacccatgccgccatcatc
aaatcagctcaccccagtcccctgtctgctaacagggggttcttcggctcccggcctttt
tcccgtaccaatgcttacctggagcagatgggggcaaaaccagtaagatgggacctcccc
taa
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