Scardovia inopinata: SCIP_1019
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Entry
SCIP_1019 CDS
T03977
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sij03400
]
SCIP_1019
DNA repair and recombination proteins [BR:
sij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SCIP_1019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
ChlI
DnaB_C
Lon_C
DUF7125
Rad51
RecA_N
ABC_tran
NACHT
AAA_24
AAA_16
CREG_beta-barrel
AAA
MCM
AAA_22
NTPase_1
Fer4_NifH
EAD2
nSTAND3
DZR
Motif
Other DBs
NCBI-ProteinID:
BAR07086
LinkDB
All DBs
Position
1288907..1290322
Genome browser
AA seq
471 aa
AA seq
DB search
MAKSPRKYVCSECGWDGSKWYGRCPNCGQWGTIEEFHESSLPSSHSRASSSRSLSQAETE
AILKPVTDEGLHDVVRLSTGFEEFNRVLGGGIVPGAVILMAGEPGIGKSTLLLETAGNIS
RALQTEGKKILYISGEESLAQIRMRARRIGAVVANLLLASTTDLATVASLIRRESPALAI
VDSVQTIYDQETDGIPGGSTQVRQVAVSLIDCAKSLGIPILLVGHVTKDGSIAGPRTLEH
LVDVVCQFEGDNQTALRLLRSLKNRFGPTDEVGCFDMSGEGIEEVADPSGLFVSDSQEQS
AGTCVTFIVDGHRSLPLEIQALVTSSVLPSPRRTTNGVDYNRLAMIVAVLHRHGRISLLN
NDIYVSTIAGGSAREPACDLAIAAALASAAREIPIDRQTLCLGEISLTGQIRPVPRITNR
LREAARIGFTRALVPRHRKGSPWYKEADSRHIGNLDLVEVSSLKEALEQLL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtcaccaaggaagtatgtatgctctgaatgcggatgggacggatccaaatgg
tatgggcgctgtcccaattgcggccagtggggaacaatcgaggaatttcacgaatcatcc
ctgccctcctcccattccagggcatcatcctctcgttccctcagccaggcggaaacagaa
gccattcttaagcctgttaccgacgaaggcctgcacgatgttgttcgcctgtcaaccggt
ttcgaggaatttaaccgggttctgggcggaggaatagtgcctggagctgtgattcttatg
gcaggagaaccaggcattggaaaatccactcttctactggaaacagcagggaatatttcc
agagccctccagacagaggggaagaaaattttgtatatttcaggtgaggaatccctagct
caaatccgtatgcgagccaggaggattggagcggttgtcgccaatctgcttctggcctct
acaaccgacctggcgacggtagcctctttgattcgccgggaatctccggccttagccata
gttgattcagtgcagacaatttatgatcaggaaacggacggtatccccgggggcagcacc
caggtcaggcaggttgcagtcagtctcattgattgcgccaaaagtctgggaatccccatc
ctcctggtaggtcatgtaactaaagatggttccattgccggccccagaaccctggaacat
ctagtcgacgtagtctgccagtttgagggtgataatcagactgctttgaggctgctgagg
agcctaaagaatcgttttggccccactgatgaagtaggctgttttgacatgagcggggaa
ggcatagaggaagttgctgacccaagcggcctttttgtcagcgattctcaggaacaatca
gcaggaacctgtgtgacttttattgttgatggtcatcgcagtcttcctcttgaaattcag
gccctggtcacttcttctgtcctgccctctcccagacgaaccaccaatggagtggactac
aaccgcttggctatgattgtagctgttcttcaccggcatggcaggatatcgttactcaat
aatgatatttatgtgtcgactattgccggaggttctgccagggaacccgcctgtgacctg
gctatcgccgctgccttggcctcagctgccagggagattcccattgaccgccagaccctc
tgcctgggagaaatctccctgacggggcagatccggccggtcccccgaataacaaaccgc
ctgcgcgaagcagctaggataggttttacccgggctctggttcctcggcacagaaaaggc
tcgccgtggtataaggaagcagattcacgtcacatcgggaatctggacctagttgaagtc
tcctccctgaaagaagccctggaacagcttctgtag
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