Scardovia inopinata: SCIP_1052
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Entry
SCIP_1052 CDS
T03977
Name
(GenBank) ABC transporter ATP-binding component
KO
K02003
putative ABC transport system ATP-binding protein
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sij02000
]
SCIP_1052
Transporters [BR:
sij02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
SCIP_1052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
RsgA_GTPase
AAA_22
AAA_25
AAA_16
AAA_15
AAA_27
FtsK_SpoIIIE
nSTAND1
AAA_30
nSTAND3
AAA_33
AAA_28
NACHT
RNA12
AAA_14
ATPase_2
Rad17
cobW
Motif
Other DBs
NCBI-ProteinID:
BAR07119
LinkDB
All DBs
Position
complement(1333134..1333892)
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AA seq
252 aa
AA seq
DB search
MLAISAQHVTKDYGQGSGAVHALKDVSVNFDQGKFTVIMGPSGSGKSTMLHTLAGLDSVT
GGHIFLDGQDITVMSDKELTLLRRHKIGFIFQSFNLLPMFDARGNILMPLTLAGAKADKK
WFNTLTTTLGLTDRLDHRPHELSGGQQQRVAIARALITKPSVVFADEPTGNLDSASSAEV
LGFLKKSVTELGQTIIMVTHDPVAASYADRAIMVADGRIVADIDHPQADQMSALLVAEQE
KARASAAAGLSR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgttagctatatcagcccagcacgtgactaaagattatggtcagggcagcggagccgtt
cacgctctgaaagatgtcagtgtcaactttgaccagggcaagtttaccgttattatgggt
ccttccggatcaggaaaatcaaccatgctccatactttagccggcctagacagcgtgacc
ggcggtcatatctttctggatggtcaggatattaccgtcatgagcgacaaagaactgacc
ctgctcaggcggcataagatcggttttattttccagagttttaatctcctgcccatgttt
gatgcccgggggaatattcttatgcccctaaccctggccggggccaaagcagataaaaaa
tggtttaataccttgactactactttgggactgacggatcgcctggatcacagacctcat
gagctctctggcggtcagcagcagagggttgccattgcacgggctctgattaccaaaccc
tcggttgtttttgcagatgagccaacaggaaatttggattctgcttccagcgccgaagtc
ttgggatttctcaagaaatcagtcactgagctaggacaaaccattattatggtaacccat
gatcctgttgctgcctcatatgctgatagagccatcatggttgctgatgggcggattgtt
gccgatattgaccatcctcaagcggatcagatgagtgctcttctggtagccgaacaggaa
aaagccagagcatcagctgctgctggtttgagtcggtaa
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integrated database retrieval system
