Scardovia inopinata: SCIP_1078
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Entry
SCIP_1078 CDS
T03977
Name
(GenBank) transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sij03000
]
SCIP_1078
Transcription factors [BR:
sij03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SCIP_1078
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_24
HTH_3
TMP_2
HTH_IclR
HTH_23
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
BAR07145
LinkDB
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Position
complement(1365635..1366645)
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AA seq
336 aa
AA seq
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MAYVTIRDIALRSGTSVSTVSRALNNTGRIAPVTKSRIEKAARELGYIPDSRAKAMRSTK
TGLAGLLVPDIRNPYFADLAYAIQDTLFNAGYCTSIGTSSEDSAQQDAYIVSMLSQHIDG
MIIVPRGGRTAALESLVTMEIPTVFVDRHVSGMPQIPVVDSDPLPGLQAALGDFQAHGYK
KIGYISGPILDSPTLQEREYTFRTLAGALFGEENVFVESTSFSHTSCLPVLRRMRQSGVN
AFIFGYSQDAIQAISIFGSQGATIGGDISLVSFDDLELFQLLTPKISVVSQQVQKIGSLG
AQIFLNLVEGGEQPDSQRVETVYFPRQSVGCAAQDK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgtaacgattcgcgatatagcgctgcggtcaggcacatcggtttccaccgtg
tctcgtgccttgaacaatactggcaggattgcaccggtgaccaaaagccgtatcgagaaa
gcagccagagagctgggatacattcctgattctcgagctaaagctatgaggtcaacaaaa
acaggcctggctggcctgctggtaccggatatccgcaacccttacttcgcagatcttgcg
tatgcaattcaagacacactgtttaatgcaggttattgcacgtcaattggcacttcttca
gaagacagtgcccagcaggatgcctacattgtaagcatgctgtcacagcatattgacgga
atgatcattgttcccaggggcggcagaacagccgccttggagtcgctggtaaccatggag
attcctacagtttttgtagacaggcacgtgagcggaatgccccaaattcctgtggtggat
tccgatcctcttcctggccttcaggcagcccttggcgactttcaggcgcatggatataag
aaaattggatatatatccggccctattctggattcgccaaccctgcaggaaagggagtat
accttccgcactcttgccggggctctctttggcgaggaaaacgtgttcgtagaatcaacc
agcttcagccacacctcctgcttaccggttttgcgccggatgagacagtcaggggtgaat
gcttttatttttgggtattcgcaggatgctattcaggctatatctatcttcgggagccaa
ggggcaactatcggcggcgatatttccctggtctcttttgatgatctggaacttttccag
ctgctgacccccaaaatttcggttgtttctcagcaggttcaaaaaattggttctttaggg
gcacagatttttctgaacctggtggaaggaggcgagcagcctgactctcagcgggttgaa
actgtatattttccccgccagtcagttggctgcgccgcccaggacaaataa
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