Scardovia inopinata: SCIP_1193
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Entry
SCIP_1193 CDS
T03977
Name
(GenBank) putative ABC transporter substrate binding component
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
sij
Scardovia inopinata
Pathway
sij02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIP_1193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sij02000
]
SCIP_1193
Transporters [BR:
sij02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
SCIP_1193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BAR07260
LinkDB
All DBs
Position
complement(1498948..1500705)
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AA seq
585 aa
AA seq
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MSFKKKITAAIAAVVSATMLFSGCGAVSSESGSKEKDDGSLMTVDVYDDLANYQGIQKGW
FAKIIKDKFNIKLNIIAPNVAGGGSTLFDTRSTAGNLGDIIITGYGSGRGSKLVKAKLIS
DMTPYLNDMSNIKKYAEAEQALNKAIGQKSGVWGIPGSVSTRKPTVAGEGLEPTFGPYVR
WDIYKKVGYPHMDTLEDLVPVLKKMQDEARKESGRKDIYAMSLFKDWDGNMMNNAKQPAC
FYGFDEMGFVLAKADGSEYQSITKKGGIYERVLRFFNKAYRAGLVDPESTTQNYDTMNSK
YKDGKVLFSFWPWLGQAAYNTTEHKAQGKGFMLAPIKDMKIFSYGATPNGGTTAIFLGSK
TKNKQRLVKFIDWLYSTEGVYDSGAQTGGAAGPKGLNWTIKNGQPILTKFGETVLSGANS
NVPASFGGGSYSDGVSALNYPTEIVNDIDPGTGQSFNASMWPSELKKTNANPLTKDWQKH
MGGAKTTMDYLEKNKMILVAPGATYTQPDEDSQISTLRGSVKTQIVNASWKASFASSNSE
FTNILNTMRNTVQGLGIDQVMKVDMQNAKDQNTARVAIAQQYKSN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaagaaaaaaatcactgcggcaatcgccgcagttgtgtcagcaacgatgctg
ttcagcggctgtggtgctgtatcctcagaatctggcagcaaagagaaagacgatggttca
ctcatgaccgtcgatgtttacgatgatttggccaattaccaaggtattcaaaaaggatgg
tttgctaagatcatcaaggataaattcaatattaaactcaacattattgctccaaacgtt
gcaggaggcggcagtactctttttgatacccgatctactgcaggaaacttgggtgatatt
atcattacaggttatggctcgggtcgtggctccaaactggtgaaggccaaacttatttct
gatatgactccttatctcaatgatatgtctaatattaagaagtacgctgaggctgagcag
gccttaaacaaggctataggccagaaatcgggtgtgtggggtattccgggatctgtttct
actcgtaaaccaacagtggcaggcgaagggttggagcctacgtttggtccctatgtcagg
tgggacatttacaagaaagtaggctatcctcacatggatactctggaagatctggttccc
gttctaaagaagatgcaggatgaggcccgtaaagaaagtggacgcaaagacatatatgcc
atgagtctctttaaagactgggatggcaatatgatgaataatgcaaaacagcctgcttgc
ttctatggctttgatgaaatgggttttgtccttgcaaaagcagatggttctgaataccaa
tccattactaagaaaggcggaatctatgaacgggttttacgttttttcaataaggcttac
cgcgctggtctggtcgacccagaatctaccactcaaaattatgacaccatgaattcaaaa
tataaggacgggaaggttcttttctccttctggccctggttggggcaggccgcctataac
accacagagcataaggctcagggtaaggggttcatgcttgcacctatcaaagatatgaag
attttctcttatggagcgactcctaatggtggaacaacagcaattttcttaggatctaaa
actaagaataagcaacgtctggttaagtttatcgattggctctattccacagaaggcgtt
tacgattctggagctcagacaggtggagctgctggccccaagggtttaaattggaccatt
aaaaatgggcagccgattttaacgaaattcggtgaaactgttctcagcggtgccaactct
aatgtgcctgcttcttttgggggaggttcatattcagatggcgtttcggctttgaactat
ccaacagaaatagttaacgatattgatcctggaaccggtcaatcctttaacgcttccatg
tggccaagtgagttgaaaaagactaatgctaatcctctgactaaagattggcaaaagcat
atgggaggtgcaaagacaaccatggattatctggaaaagaacaaaatgatcctggtggct
cctggcgcaacctatactcagcctgatgaggattcccaaatttccactcttcggggatcg
gtgaagactcaaatagtgaatgcttcctggaaagcatccttcgcatcaagtaattctgaa
tttaccaatattcttaacactatgcgtaatactgttcaaggcttgggaattgaccaggta
atgaaggtagatatgcagaatgccaaggaccagaatactgctcgagtagcaattgcacag
cagtataagagcaactaa
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