Scardovia inopinata: SCIP_1348
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Entry
SCIP_1348 CDS
T03977
Name
(GenBank) chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
sij
Scardovia inopinata
Pathway
sij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCIP_1348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sij03019
]
SCIP_1348
03110 Chaperones and folding catalysts [BR:
sij03110
]
SCIP_1348
03029 Mitochondrial biogenesis [BR:
sij03029
]
SCIP_1348
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sij04147
]
SCIP_1348
Messenger RNA biogenesis [BR:
sij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCIP_1348
Chaperones and folding catalysts [BR:
sij03110
]
Heat shock proteins
HSP70 / DNAK
SCIP_1348
Mitochondrial biogenesis [BR:
sij03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
SCIP_1348
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
SCIP_1348
Exosome [BR:
sij04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCIP_1348
Exosomal proteins of breast cancer cells
SCIP_1348
Exosomal proteins of colorectal cancer cells
SCIP_1348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
UFL1
Hexokinase_1
HAAS
Motif
Other DBs
NCBI-ProteinID:
BAR07415
LinkDB
All DBs
Position
complement(1670459..1672345)
Genome browser
AA seq
628 aa
AA seq
DB search
MGRAVGIDLGTTNSCIATLEGGQPTVIVNAEGVRTTPSVVAFSKSGEILVGEVAKRQAVT
NVDRTISSVKRHMGTDWSVDIDGKKWTPQEVSAQILMKLKRDAEAYLGEPVTDAVITCPA
YFNDAQRQATKDAGTIAGLNVLRIINEPTAAALAYGLEKGKEDERILVFDLGGGTFDVSL
LEIGKDEDGFSTIQVQATNGDNHLGGDDWDQAIIDWLVSEVKNKYGVDLSKDKIALQRLK
EAAEQAKKELSSSSSTSISMQYLAMTPDGTPVHLDETLTRAHFEEMTADLLNRCRDPFNA
VLRDSGISVSQIDHIVLVGGSTRMPAVQDLVKELTGGKEPNKTVNPDEVVAVGAAVQSGV
IKGDRSDVLLIDVTPLSLGIETKGGIMTKLIDRNTAIPTKRSEVFSTAEDNQPSVLIQVY
QGEREFARDNKPLGTFELTGIAPAPQGVPKIEVTFDIDANGIVHVSAKDQGTGKEQSMTI
TGGSGLPKEEIDRMVKEAESHASEDKKRREEAETRNQAESFAYQTEKLVKDNKDKISDDL
AKEVTDKVNALKEALKGEDIEAVKTAQTELMNSAQKIGQALYAQQQSAGADGAAAASGAG
AGSSAGASSNDDDVVDAEVVDDDDKDKK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgcagtaggtatcgatttgggtactactaactcctgcatcgcaacactggaa
ggtggacagccaacagttattgtaaacgctgaaggtgttcggacaactccgtcggttgtg
gctttcagcaaatcaggcgagattttggttggagaagttgccaagcgtcaggctgttacc
aacgtcgaccgcactatttcttcagtcaagcgtcatatgggcacggactggagcgtcgat
attgatggtaagaagtggactccgcaggaggtctccgcccagattttgatgaagctcaag
agggatgctgaagcttaccttggtgagcccgttaccgatgcggtgattacctgccctgct
tatttcaacgacgctcagcgtcaggccactaaggatgctggtaccattgccggtctaaac
gttttgcgcattatcaatgagcctactgcagcagctcttgcctatggtttggagaagggc
aaggaagatgagcgcattctggtcttcgatttgggcggcggcaccttcgatgtgtccttg
ctggaaattggcaaggatgaggatggtttctcgactattcaggttcaggccacgaatgga
gataatcacctgggcggcgatgactgggatcaggccattatcgactggctggtttctgaa
gttaagaataagtatggggtagacctgtctaaagacaagattgccctgcagcgcctgaag
gaagcggctgaacaggctaagaaggagttgagctcgtcttcttccaccagcatttccatg
cagtacttggctatgactcctgatggaactcctgttcatttggatgaaactctcacccgg
gctcattttgaggaaatgactgctgacctgttaaaccgctgccgtgaccccttcaatgct
gttctgcgggactctggtatttccgtttcgcagattgatcacattgtcctggttggtggc
tctacccgtatgcctgccgttcaggatctggtcaaggaattaaccggcggcaaagagccc
aacaagacggtcaatcctgatgaagttgtggctgtaggtgctgctgttcagtcaggtgtt
attaagggagaccgctctgatgtcctcctcattgatgtcactcctttgagtttgggaatt
gaaaccaagggcggcattatgaccaagctgattgatcgcaatacagctattcctactaag
agaagcgaagtcttctctactgccgaagataatcagccgtctgtgctgattcaggtttac
cagggtgaacgcgagtttgcccgcgataacaagcccttgggcacttttgagctgactggt
attgctccggctcctcagggtgtccccaagattgaggtcacttttgacattgatgccaac
ggcatcgtccatgtgtccgctaaagatcagggaaccggcaaggaacagtcgatgactatt
accggcggatctgggctgcctaaggaggagattgatcgtatggtgaaggaagctgaatct
cacgcttcggaagacaagaagcgtcgtgaggaggctgagacccgcaaccaggctgaatcc
tttgcctatcagacagagaagctggttaaagacaacaaggacaagatcagcgacgacctg
gctaaggaggtcaccgacaaggtcaacgctctgaaagaagccctgaaaggtgaggatatt
gaagccgtgaagactgctcagactgagttgatgaattctgctcagaagatcggtcaagct
ttgtatgctcagcagcagtcagctggtgctgatggtgccgctgctgcttcaggtgctggc
gcaggttcttccgctggtgcttcttccaatgacgatgacgtggtagacgccgaagttgtg
gatgacgatgataaggacaagaagtaa
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