Scardovia inopinata: SCIP_1395
Help
Entry
SCIP_1395 CDS
T03977
Name
(GenBank) putative penicillin binding protein transpeptidase
KO
K05364
penicillin-binding protein A
Organism
sij
Scardovia inopinata
Pathway
sij00550
Peptidoglycan biosynthesis
sij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCIP_1395
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sij01011
]
SCIP_1395
Peptidoglycan biosynthesis and degradation proteins [BR:
sij01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SCIP_1395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
BAR07462
LinkDB
All DBs
Position
1731068..1732534
Genome browser
AA seq
488 aa
AA seq
DB search
MNANLRRIFNIVIALMVILGISSSLMMVVRANSLNADSRNTRALYSEFASDRGSILASDA
NTVLASSRKVKDAFQYQRIYPQGAAYSSVTGFFSINQRARYGVEASRNEQLSGMSDSLWI
ARVQSLIEGKANKGAIVETSIDPKLQSLGYRLMQGKTGAVVAMEPTTGRILAMVSTPSYD
PNILASHDTVAANKAWSQLAGGSNSPLINKATSQLFPPGSTFKLVVAAAALESGKYTMDS
QIPAGPSYTLPNTTTKLTNSSIPANGVNGKISLSDALAYSSNTAFAQLAVALGKDAIKEE
AEKLGFGSSITIDGNDTLGTPMTSVASVFPDTTSDDRLALAGIGQGDTTETPLLNAMIAS
TIANKGVMLHPTIVDRVRSTDLSVISTRSTTILSQAFSAQTADGLSKAMQSVITKDAPSL
KISGIAVAAKTGTAQVGLSKTTNDGWITGFAPADNPKIAISVVVTGTTTFGVTTAGPIMK
QLMQEYLQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctaaccttcgccgcattttcaatattgtgattgccctcatggtgattttggga
atttccagctcccttatgatggtggtcagagccaattccctcaacgccgactcccgcaat
acccgggccttatacagcgaattcgccagcgaccggggaagcatcctggcttctgacgcc
aacactgtcctggccagctcaagaaaggtaaaagatgcctttcaatatcagagaatctac
cctcagggagctgcttattcatcggtaaccggctttttctccatcaaccagagagccaga
tatggggtagaagccagccgcaatgaacagctaagcggaatgagcgacagtctatggatt
gctcgggttcaatcccttatcgagggtaaggccaacaagggggccatagttgaaacctcc
attgaccccaagcttcagtctctaggctaccgactgatgcagggcaaaaccggtgccgtg
gtagccatggaacccaccactggccgcattctggccatggtaagcacaccaagctatgac
cccaatatcctagcttctcacgacactgtcgctgctaataaagcctggtcccagctggca
ggaggctcaaacagtcccttgattaacaaggcaaccagtcagctcttcccgcctggatcc
acctttaaactggtggttgcggctgccgctctggaaagcgggaaatatactatggattcc
caaataccggctggcccttcttacaccctgcccaacaccaccactaagctgaccaacagc
tccattccagcaaacggggttaacggcaaaatcagcctgtctgacgccctggcatattcg
tccaatacagcctttgcccagctggcagtagctctcggcaaggatgccatcaaggaagaa
gcagaaaaactgggcttcggcagctctattaccatcgatggcaacgataccctgggcact
cccatgacttcggtagcctcagttttccctgataccacttctgacgaccgtctggctttg
gcaggcataggtcagggagacactacagaaactccccttcttaatgccatgattgcttcc
actattgccaacaagggagtcatgctccatcccaccattgtggaccgggtccggtctact
gacctgagtgtgatatccacccgttctacaactatcctttcccaggcattttcagcacaa
actgctgatggtctcagcaaagccatgcagtccgtgatcacaaaagacgcaccctctctt
aaaatctcaggtattgctgtggctgccaaaacaggaactgcccaggtaggcctgtccaag
accactaatgatggctggattacaggttttgccccggcagataaccccaagattgctatc
agcgtagttgttactggcactacaacctttggagttaccacagcgggaccgattatgaag
caactgatgcaggagtacctccaatga
DBGET
integrated database retrieval system
