Scardovia inopinata: SCIP_1414
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Entry
SCIP_1414 CDS
T03977
Name
(GenBank) conserved hypothetical protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sij
Scardovia inopinata
Brite
KEGG Orthology (KO) [BR:
sij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sij03009
]
SCIP_1414
Enzymes [BR:
sij01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
SCIP_1414
Ribosome biogenesis [BR:
sij03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SCIP_1414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
BAR07481
LinkDB
All DBs
Position
complement(1752529..1753539)
Genome browser
AA seq
336 aa
AA seq
DB search
MDTGGMNMQSLDSLRIFKPMQGKVVLAATPIGNTSDASARLAALMEHATIVAAEDTRRLY
DLANRMGIRVEGRVIAYHDHNERQKADSLLDQVEAGATVLVVSDAGMPTINDPGLAIVRR
AIERGLPVTCAPGPSAVLDALALSGLPTDRFCYEGFLPRKHSERLRALRLIRSEARTIVY
YETPHRISDSMDDLLEILGPNRPMALARELTKDYEEVRRGSVSQIRSGVIADPPRGEIVL
VIAGSGYQPKDKSLLSNPALSASSASSASSASSTDALSAESVNSLDFLARLSLDYSRKNQ
VKIKQAISRIIPDHPLADGSVAKSKDVYAAVLRLKD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatacagggggcatgaatatgcaaagtttggattctctgcggatatttaagcccatg
caggggaaagtcgtactggcggcaacacccattgggaatacttctgatgcttctgcccgt
ctggcggcgcttatggagcatgccactattgttgctgcggaagatacccgtcggctctat
gatcttgcaaaccggatggggatacgggtcgagggacgggtcattgcctatcatgatcat
aatgagcgtcagaaggctgactcacttttggatcaggttgaggctggggctaccgttctg
gtggtttcggacgcaggcatgccaactattaatgatcctggcttggcgattgtcagacgc
gctattgagcgcggtctgccggtgacctgtgcacctggcccttctgccgtcttggatgct
ttggctttatctggtttgccaacggatcgattctgctatgaaggatttcttccccgtaaa
cacagcgagcgcctgagggctctgcgactgattcggtcggaagccagaacaattgtctat
tatgagacccctcatcgtatttctgattccatggatgatttgttggaaattcttggcccc
aaccgtcctatggctcttgcccgcgagctgacaaaggactatgaggaggttcgccgagga
agcgtcagccagatacgttcaggagttatagccgaccctccccggggcgagatagttctg
gttatagctggttctggttatcagcccaaagacaagagtctgctgtccaacccagctctg
tctgcttcctctgcttcctctgcttcctctgcctcatctaccgatgcgctgtcagcggaa
tccgtgaattctctagattttcttgcccgtctatctcttgattattccaggaagaaccaa
gtgaaaatcaaacaggcaatttcccggattattcctgaccatcctcttgctgacggatcc
gtggctaaaagcaaggatgtatatgctgccgtcctgcggcttaaagattag
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integrated database retrieval system
