Streptococcus iniae SF1: K710_0937
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Entry
K710_0937 CDS
T02686
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sik
Streptococcus iniae SF1
Pathway
sik03030
DNA replication
sik03430
Mismatch repair
sik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K710_0937
03430 Mismatch repair
K710_0937
03440 Homologous recombination
K710_0937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sik03032
]
K710_0937
03400 DNA repair and recombination proteins [BR:
sik03400
]
K710_0937
Enzymes [BR:
sik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K710_0937
DNA replication proteins [BR:
sik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K710_0937
DNA repair and recombination proteins [BR:
sik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K710_0937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AGM98711
LinkDB
All DBs
Position
893636..896740
Genome browser
AA seq
1034 aa
AA seq
DB search
MFAQIDTKTVYSFMDSLVDLESYIQRAKALGYQSIGIMDKDNLYGAYHFIKNCQKHGLQP
ILGLEIDYPINGGNHPIYLIALNNAGYKSLLKISSAKMSARFVPSELVNYCQNLAVIIPY
EDGQGDLDLPFDYFLGIYETTDIPVTKRQLIPLRQVRYFEEEDREALQILHAIRDNLNLN
ETAVVEADHFLENCQVMTQRFQEKAPQALETLENVLASIDYQFDSKLKLPRFNREKKAHL
ELCQLTEAGLKQRQLWLPVYQERLKQELAIISEMGFDDYFLIVWDLLRFGRSKGYYMGMG
RGSAAGSLVAYALQITGIDPVKNNLLFERFLNKERYSMPDIDIDLPDIYRSEFLHYVRDR
YGRDHSAQIVTFSTFGPKQAIRDVFKRYGVPEYEISHFSKKIGFKDTLTSVYEKNISFRQ
AINSKLEYQKAFEMARRIEGNPRQTSIHAAGIVMSDDNLTDHIPLKQGEDMMITQYDAAA
VEANGLLKMDFLGLRNLTFVQKMKEKVAKEFGQDILIEDINLEDKKTLALFARGDTKGIF
QFEQNGAISLLKRIKPVKFEEIVATTSLNRPGASDYTNNFIKRRMGQEKIDLIDPVIAPI
LEPTYGIMLYQEQVMQIAQVFAGFTLGKADLLRRAMSKKDANEMSKMEADFLEGASKLGR
SPETAKVLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPSVFFDVIMNYSNADYIT
DALDSDFRVVPLSINTIPYTDKVENGTILMGMKNIKGIPRDLAYWIIEARPFTSIENFLM
QLPEKYQKKDFLTPLISIGLFDCFEKNRRKVLENSDALVTFVNELGSLFADSSFAWVEAD
DFTNSEKYQMERDYIGVGLSKHPLVEMMQNFKGDFTSISKVVKDSDVHLLVQIETIRVIR
TKSNGQQMAFMTVTDTKKKMDVTLFPEQFIRFKELLIEGEMYYIGGRVKERDGRLQLILN
SMSAINLKKYWILLENHEHDQAVAEIIDQFPGDVPILIHYQETKETLQVQNKSVEVSSQL
EQALKEFVVKTVYQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaaatcgatacaaaaacagtttattcctttatggatagtttggttgacttg
gaaagctatattcaaagagctaaagctttgggttaccaatcaattggaataatggataaa
gataatttgtatggtgcttatcattttatcaaaaattgccagaaacatggtctacaacct
attttgggtttggaaattgactacccaattaatggaggaaatcatccgatttatttaatt
gcacttaacaatgctggttataaaagtcttttgaaaatatctagtgcaaaaatgtctgca
cgttttgtgccttcagaacttgtcaattattgccagaatcttgccgttattattccttat
gaggatggccagggcgaccttgatctgccttttgattatttccttgggatttatgaaaca
actgatattccagtaacaaagcgccagctgattccattaaggcaagtaaggtattttgaa
gaagaagaccgtgaagccttgcagattttacatgctattcgagataatttaaacttaaat
gagactgctgtggttgaagctgatcattttttagagaactgtcaggtgatgacccagcgc
tttcaagaaaaggcgcctcaagctttggaaactttagaaaatgtccttgcaagtatcgac
tatcagtttgattcaaaattgaagttgccaagatttaaccgtgagaaaaaagctcatttg
gagttgtgccagttaacagaagcagggcttaaacaaaggcaattgtggcttccggtttat
caggaacgcctgaagcaggagctagcaattatctctgaaatgggatttgatgattatttt
cttattgtctgggatcttctacgttttgggcgtagtaaaggctattatatgggaatggga
cgtggttcagcagctggtagtttagtggcctatgctttgcagattactggaattgatccc
gtcaaaaataacctactttttgagcggtttttaaataaagaacgctatagcatgcctgat
attgatattgatttgccggatatctaccgttcagaatttcttcattatgtgcgtgatcgt
tatggtagggatcattcagctcagattgtcaccttttcgacatttggtccaaaacaagct
attcgggatgtttttaagcgttatggggtgcccgagtatgagattagtcatttcagtaaa
aaaattggatttaaggacacactaaccagtgtttacgaaaaaaatatcagtttcagacaa
gccattaacagtaaattagaatatcaaaaagcctttgaaatggctagacgcattgaagga
aatccacgtcaaacctctattcacgctgcaggaattgtcatgagtgatgataatctgaca
gatcatattccactcaagcaaggggaagatatgatgattacgcaatacgatgctgctgca
gtagaggcaaatggtcttttaaagatggattttttgggcttgcggaatctgacatttgtt
caaaaaatgaaagaaaaggttgccaaagaatttggtcaggatattcttattgaagatatt
aatcttgaagataaaaaaaccttagctctttttgctcgtggtgataccaaagggattttc
caatttgaacaaaatggtgccattagtcttttaaaacggattaagcctgtaaaatttgaa
gaaattgttgctacaaccagcctgaataggcctggagcaagtgattacactaataatttc
attaagcgtcgtatgggtcaggaaaaaattgatttaattgatcctgtcattgcgcccatt
ttagaaccaacttatggcattatgctttatcaggaacaagttatgcaaattgctcaggtg
tttgcaggctttactcttggaaaagcagatttattacgccgagccatgtccaagaaagat
gccaatgaaatgagcaaaatggaagccgattttcttgaaggggcttcaaaacttgggcgt
tcgcctgaaacagcaaaagtgctttttaaacggatggaaaaatttgcgggttatggcttt
aatagaagtcacgcctttgcttattctgccctagcttttcaattagcctatttcaaagcg
cattacccatctgtcttttttgatgttatcatgaattactctaatgctgattatataaca
gatgccttagattctgattttcgtgtggtaccattatccattaataccattccttatacc
gataaggttgaaaatgggacgattttaatgggcatgaaaaatatcaaaggaatccctaga
gacttagcttattggattattgaagcacggccatttacaagcattgaaaattttttaatg
caattaccagaaaaataccagaaaaaagatttcttgacacccttgattagcattggttta
tttgattgtttcgaaaaaaacagacgtaaagtcttggaaaattctgatgctttagtaact
tttgtcaatgagttaggatctttgtttgcggattcttcctttgcttgggttgaagcagac
gattttacaaacagtgaaaaatatcagatggaacgtgattatattggcgtcggtttaagc
aaacatccgctagttgaaatgatgcagaattttaaaggggatttcacctcaatttcaaaa
gtggttaaagacagcgatgtgcatttattggtgcaaattgaaacgattcgtgtgattcga
acaaaatcaaatgggcaacaaatggcctttatgacagtgactgataccaagaaaaaaatg
gatgtaacactatttccagagcagtttatccgttttaaagagttgctaatcgaaggggaa
atgtattatataggtggacgtgtcaaggaacgtgatggacgtcttcaactgattttaaat
agtatgagtgcgattaaccttaaaaaatattggattttattagaaaaccatgagcatgat
caggctgtagcagagataattgatcagtttccaggagatgttccaatccttattcattac
caagagacgaaagaaactttgcaagttcaaaataaatccgtagaggtgtcaagccagtta
gaacaagctttaaaagaatttgtagtgaaaacggtttatcaataa
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