Streptococcus iniae SF1: K710_0953
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Entry
K710_0953 CDS
T02686
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sik
Streptococcus iniae SF1
Pathway
sik03420
Nucleotide excision repair
sik03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K710_0953
03430 Mismatch repair
K710_0953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sik03400
]
K710_0953
Enzymes [BR:
sik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K710_0953
DNA repair and recombination proteins [BR:
sik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K710_0953
MMR (mismatch excision repair)
Other MMR factors
K710_0953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
AGM98727
LinkDB
All DBs
Position
914786..917086
Genome browser
AA seq
766 aa
AA seq
DB search
MNPLLNGMNDKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKCVNPWNILAITF
TNKAAREMKERALALNPATSDTLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKQLNLDPKKWNERAILGTISNAKNDLLDEKAYDMQAADMYTQMVAKCYKLYQEELR
RSEAFDFDDLIMMTLRLFDQNPDVLSYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFRN
ICVVGDADQSIYGWRGADMQNILDFEKDYSDAKVVLLEENYRSTKTILKAANDVIKHNQN
RRDKKLWTQNQDGEQIVYHRTNDEREEAVFVASTVSNMCQEMGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDLISYLNIIANPSDNISFERIVNEPKRGVGPG
TLEKLRLFAYEHQMSLMDASSNLFMSPLKGKAAQAIMDFSTHLLDLRERLDQLSVTELTE
KVLEETGYIEALRLQNTLESQARIENIEEFLSVTKNFDDNSAKQEQNETGLDKLGRFLND
LALIADTDDGDVDSAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRSSEDPSELEEERR
LAYVGITRAEEVLFLTNASTRTLFGKTNYNRPSRFLTEISEELLSHQGLARPSHSSFGVT
FSKETKQQFGQGMSLSQALQSRKAKVQADRTSPNSYAKQAMPFVSNNANSKSEVWEIGDF
AYHKKWGKGTVLEVSGSGKTMELKIKFPEVGLKKLLASVAPIEKVD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttactaaatggaatgaatgataaacaagccgaggcggtccaaacaacagaa
gggccacttttaattatggctggagcaggttcaggtaaaacaagagtgttaacgcatcgt
attgcatacttgattgatgagaaatgtgtcaatccatggaatattctagcaatcaccttt
accaacaaagctgcgcgtgaaatgaaagaaagagcattagctctaaatccggcaacatca
gataccttgattgcaacttttcactccatgtgtgttcgtattttaagacgtgaagctgat
catattggttacaatcgtaactttactattgtagatcctggtgaacaacgtactttaatg
aaacgaattcttaaacaactcaatttagaccctaaaaaatggaatgaacgggcgatttta
ggaaccatttcgaatgccaaaaatgatcttttagacgaaaaagcttatgacatgcaagct
gctgacatgtatactcaaatggttgccaagtgttataagttatatcaagaagagttacgt
cgcagtgaagcttttgattttgatgatttaatcatgatgacccttcgcctttttgatcag
aatcctgatgtcttaagttattatcagcaacgttatcaatatatccatgtggatgagtat
caagatacaaaccatgctcagtatcaattggttaaattattagcatcacgttttcgaaat
atttgtgtggttggtgatgctgatcaatccatttatggttggcggggtgccgacatgcaa
aatatcttagattttgaaaaggattattcagatgcgaaggtggttttgttagaagaaaat
taccgctcaaccaaaaccatcttgaaagcagcaaatgatgtgattaaacataatcaaaat
cgtcgtgataagaagttatggacacaaaatcaagatggtgagcaaatcgtttatcacaga
actaatgatgaaagagaagaagctgtctttgttgcttctactgtttcaaatatgtgccaa
gaaatgggtaaaaacttcaaggattttgcggtgctttaccggacaaatgctcaatcccgt
acaattgaggaagccttattgaaatctaacatcccatataccatggttggcgggactaaa
ttctatagtagaaaagagattagagaccttatttcttacctaaatattattgccaatcct
tctgacaacatctcatttgaacgtatcgttaatgaacctaaacgtggtgtaggaccaggg
acgcttgaaaagctccgtctttttgcttatgagcaccagatgtccttgatggatgcttca
tcaaatcttttcatgtctcctttaaaaggaaaagctgcgcaggccatcatggatttttca
acacacttacttgatttgagagaaagattggatcaactgagcgtaacagaattaacagag
aaagttttagaagaaacaggctacattgaagcattacgtcttcaaaacaccttagaaagt
caagcacgtattgaaaatatagaagagttcttatcagtgacgaaaaactttgatgataat
tctgctaaacaagaacaaaacgaaactggtttagacaaattaggacgtttcttaaatgat
ttggctttaattgctgatactgatgatggtgatgtagacagtgcagaagtgacattaatg
acccttcatgctgcaaaaggcttggaatttccggttgtctttctgattggcatggaagaa
ggtgtctttcctttatctcgatccagtgaggatccgtcagaattagaagaagaaagacgt
cttgcttatgtagggattacaagagcagaagaagttctctttttaaccaatgcaagtacc
agaacactctttggtaaaaccaactataatcggccaagtcgtttcttaactgaaatttca
gaagaacttttaagccatcaaggcttagcaagaccaagtcactcttcttttggagtgaca
tttagtaaagagaccaagcaacaatttgggcagggaatgagtttatctcaagcacttcaa
tcccgaaaagccaaagtccaagcagacaggactagtcctaatagttatgccaaacaagca
atgccttttgtttccaataatgctaacagcaagagtgaggtgtgggagattggagatttt
gcttatcataaaaaatggggcaaaggaacggttttagaagtttctggttctggtaaaaca
atggagttgaaaataaaattccctgaagttggattaaaaaaactgttagcaagtgttgca
cctattgaaaaagtagattaa
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