Streptococcus iniae SF1: K710_1249
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Entry
K710_1249 CDS
T02686
Name
(GenBank) ATP-dependent exonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sik
Streptococcus iniae SF1
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sik03400
]
K710_1249
Enzymes [BR:
sik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K710_1249
DNA repair and recombination proteins [BR:
sik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K710_1249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
AAA_30
DUF6435
Motif
Other DBs
NCBI-ProteinID:
AGM99017
LinkDB
All DBs
Position
complement(1199535..1203182)
Genome browser
AA seq
1215 aa
AA seq
DB search
MNFEPFLDAKAIIALQEAEMASDKVQKRTAEQIEAIYSHGQNILVSASAGSGKTFVMVER
IIDKIMRGVAIDRMFISTFTVKAATELKERLEKKLIEAIKSQHNPDVKHYLSEQLHHLDQ
ADIGTMDAFTQKLVSQYGYSLGISPKYRIMQEKSEQDILKTEVFDKLFESYMQKHQGIFI
ALVQNFSGKAKTANSFKQLVYQIHQFCQSTDNPKKWLAQNFLKGVHHYQGFADYPKEELE
LFLECMQKTAAALQDITDLEDYKQVTAKGSETKAYQKHKQMIASLYEFSTHFETMYGFAK
ISQLAQDLTALLPSGQSVTVAGQKYPVFKDLQNHLEGLRHLDIIFQYQGESLPLLELLQA
FIADFSEAYLQAKMAENAFEFSDIAHFAISILEGNEAVRLAYQEHYHEVMVDEYQDNNHM
QERLLELLSTGQNRFMVGDIKQSIYRFRQADPQIFNAKFKDYQENPQHGQLIILKENFRS
QSEVLDVTNAIFTHLMDEAVGDILYDGNHQLLAGSDRQKEEHPENKCQFLIYNTDLADDS
DESTTLEESESDGISPWQVKLLVKEIIKLHTEEGVPFSDITLLVSSRTRNDTIFQAFNHY
GIPLVADGGQTNYLKSVEVMLMLDTLRTINNPLNDYALVALMRSLMFGFDEDQLARIALQ
GSNSGKIDSFYEKLCNCLKGEGEHPELISSDFKMELEQFHNTLDSWRHFAKSHSLYDLIW
KIFNDRFYYDLVATSPKAEQAQANLYALALRSSQFEKTGFKGLSRFIRMIDKILETQNDL
VDVEIDQPKNAVNLMTIHKSKGLEFKYVFILNCDKRFSMTDLHSPLILDREMGIGIKYIA
DVKEQVEAQHLNSLKVSLETLPYQLNKNRLKRATLSEQMRLLYVAMTRAKKKLYLIGKGS
QQKAQDAFSGQRTGNHLSQELRESLTTFQDWILAISENFKEDLHFDLVYVSDKDLTANQI
GRLSKESFLNQKDNQKDNRQTLEIARAIDMLDKVSELNQLYDAAIHLPTVRTPSQLKKYY
EPLMDNDGVDVIDKQTYSQKTYKLPNFSKSKVVESSQIGSALHELMQRITVSDKVSMREI
KDALALVSADDSVKEKIDLKKILAFFQETDLGQKIQAKRAFLHREAPFAMLKKDPKSQEK
FVVRGIIDGYLLFDDRIVLFDYKTDRYSTSLDMVNRYSMQMELYAQALKQAYRINKIEKY
LVLMGGQTIEVVAVD
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaaccatttttagatgcaaaggctattattgctctgcaagaagctgaaatg
gcgtcagacaaagtgcaaaaaaggacagctgaacaaattgaagcgatttatagtcatggt
caaaatattttagtttcagcctctgcaggttcaggaaaaacctttgttatggttgaacgt
attattgacaaaatcatgcgtggtgttgctattgaccgaatgttcatttctaccttcact
gttaaggcggcaactgaattaaaagagcgtttggaaaaaaagcttattgaagccattaaa
agtcagcataatccagacgtcaaacattacctgagtgaacaattgcatcacttagatcaa
gcagatatcgggacaatggatgcttttacccaaaaattagtttctcagtatggttattca
ttagggatttcacctaaatatcggataatgcaggagaaatctgagcaagatattttaaaa
acagaggtttttgataagctgtttgaaagctatatgcaaaaacaccaaggcatcttcatc
gctttggtgcaaaatttttcaggaaaagcaaagactgctaatagttttaaacaattggtc
tatcagattcaccaattctgccagtcaactgacaaccctaaaaaatggttagctcaaaac
tttcttaagggtgttcatcattatcaaggctttgccgattatcctaaagaggagttggaa
cttttcttagagtgcatgcaaaaaacagctgccgcactgcaagacattacggacttggaa
gattataagcaagttaccgctaaaggaagtgagacaaaggcttatcagaaacataagcag
atgattgcgagtttatatgagttttcgactcactttgaaaccatgtatggctttgctaag
atatcacaactagcccaagacttaacagctctcttgccatctgggcaatctgtgactgtt
gctggacagaaatatcctgttttcaaagatttacagaatcatcttgaagggctaaggcat
ttagatattatcttccagtatcagggagaaagtttgccactcttagaacttttacaagct
tttattgccgatttttctgaagcttatttgcaggctaaaatggctgagaatgcttttgag
ttttcggatattgcacactttgcaatttctattcttgagggcaatgaggctgttcgttta
gcttatcaagaacattatcatgaagttatggtagatgagtatcaagataataatcatatg
caagaacgcctcttagaattattatcaactggtcaaaaccgttttatggtaggtgatatt
aaacaatctatttaccgattcaggcaggcagatccacagattttcaatgctaaatttaag
gattatcaggaaaatcctcagcatggtcaattgattattctaaaagagaattttagaagt
cagtcagaagttttagatgtgaccaatgctatttttactcatcttatggatgaggctgtt
ggggatattctatatgatggtaaccatcaactccttgcaggaagtgaccgtcaaaaagaa
gaacatccagaaaacaagtgtcaatttttgatatacaatacagaccttgctgatgattca
gatgagtcgactacccttgaagaaagtgaaagtgatggtatttccccttggcaggttaaa
cttcttgttaaagaaattatcaaacttcataccgaagaaggtgtcccattttcagacata
acacttttagtatcttcaagaacacgcaatgataccatatttcaggcatttaatcactat
ggcattcctttggtcgctgatggtggacagacgaattatcttaaatcagttgaagtaatg
cttatgcttgataccctaaggacgattaataatcctttgaatgattatgctttagttgca
ttgatgcgttctcttatgtttggatttgatgaggatcaattggctagaatagctttacag
gggagtaattctggaaaaattgattctttttatgaaaagctctgcaattgtctcaaaggt
gaaggggagcatccggaacttatttcttctgattttaaaatggaattagaacagtttcat
aacacacttgactcttggcgtcactttgcaaagagtcactccttatatgacttgatttgg
aaaatttttaatgatcgtttttactatgacttagtggcaacaagtccaaaagctgagcaa
gctcaggccaatctctatgccctagcccttcgttctagtcagtttgaaaaaacgggcttt
aaaggtctgtctcgttttatcagaatgattgataagattcttgagactcaaaatgacctg
gtggatgtggaaatagaccaacctaaaaatgctgtcaatctaatgacaatccataaatct
aagggtttggaatttaaatatgttttcattctcaattgtgataaacgctttagcatgaca
gatcttcattcaccgcttattttagaccgtgagatggggattggcataaaatatattgca
gatgtcaaagagcaggttgaagcacaacacttgaatagtttaaaagtttcgcttgaaacc
ttaccttatcagttgaataaaaaccgtttaaaaagagcaaccttatcagagcagatgcgc
ttgctttatgttgcaatgacaagggcaaaaaagaagttatacttgattggtaaagggagc
caacaaaaggcacaagatgctttttctggacaaagaactggtaatcatttatcgcaagaa
ctaagagagtcactaactacatttcaggactggattttagccatttctgaaaatttcaaa
gaggatttacattttgatttagtatatgtgtcagataaggatctaacagcaaatcagatt
gggagattatcaaaggaaagttttttaaatcaaaaagacaatcaaaaagataaccgtcaa
acgctcgagatagcgcgtgctattgacatgttggataaggtgtcagaactcaatcaactc
tatgatgcggcaatccatttaccaactgtcagaacgcctagtcagttgaaaaaatattat
gaacctttaatggataatgatggtgttgatgttattgataaacaaacctacagtcaaaag
acttacaaacttcctaacttttcaaaaagtaaggtcgttgaatcaagtcaaattggttca
gcattgcatgaattgatgcaacgcattacagtttcagataaggtttcaatgagggagatt
aaggatgcattagcattggtcagtgctgatgatagtgttaaagaaaagattgatttgaag
aaaatattagccttttttcaagaaactgaccttgggcaaaaaattcaagcaaagagagca
ttcttacatcgtgaagcaccttttgctatgttgaaaaaagaccctaaaagtcaggagaaa
tttgttgtccgtgggataattgatggttacttgttatttgatgacagaatcgtattattt
gactataagacagatcgatattcaacaagtttagatatggtaaataggtatagcatgcaa
atggaactttatgcgcaagctttaaaacaggcctataggattaacaaaattgaaaaatac
ctggttttaatgggtggtcaaacaattgaagtagtagctgttgattaa
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integrated database retrieval system
