Streptococcus iniae SF1: K710_1469
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Entry
K710_1469 CDS
T02686
Name
(GenBank) DNA-binding helix-turn-helix protein
KO
K20373
HTH-type transcriptional regulator, SHP2-responsive activator
Organism
sik
Streptococcus iniae SF1
Pathway
sik02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K710_1469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sik03000
]
K710_1469
Transcription factors [BR:
sik03000
]
Prokaryotic type
Helix-turn-helix
Other families
K710_1469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rgg_C
HTH_3
HTH_31
HTH_19
DUF3517
Med26
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AGM99228
LinkDB
All DBs
Position
complement(1421452..1422291)
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AA seq
279 aa
AA seq
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METRLGKTLRSLRKGKQVTISALADEHLSKSQISRFERGESEISCNRLLNLLDKLNISID
EFLSIHSREHTHFFTLLTQLRKYSAEQNREGLVGLLEAYQEKPYETTMIKAVTFSIDQTI
KPDESEINQLTDYLFKVEHWGNYEIILLGNCTRFINYNTLFLLTKEMVTSFAYSEQNKSN
KVLVTQLSINCLIISIDNHYFENSCYLISKIQELLTNEIQFYEKTIFLYVHGYYKLKQGD
IEGKKEMEDALTIFQLLNENALYDAYQEHYYKQVSANAL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagacttggaaaaacattacggtctttacgaaaaggcaagcaggtaaccatc
agtgctttagcagatgagcatttatcaaagtctcaaatttcgagatttgaacgtggagaa
tccgaaatttcatgcaatcgcctcttgaatttattggataagctgaatattagcatcgat
gaatttttatcaattcactcaagggaacatactcacttttttacacttctaacacaactt
agaaaatattctgctgagcaaaatagagaaggcttagttggattattagaagcttaccag
gaaaaaccctatgagactacaatgatcaaagcagttactttttcaattgatcaaacaatt
aagccagatgaatccgaaatcaatcaattaacggattatttattcaaagttgaacattgg
ggaaattatgagattattttgttagggaattgcacacggtttattaattataatacgctt
tttctattgacaaaagaaatggtgacatcatttgcttattcagaacaaaacaaaagcaat
aaagttttagtgactcaattatccatcaattgcctaattatcagtattgacaatcattat
tttgaaaacagctgttacttaatctctaaaattcaagaacttttgactaatgaaattcaa
ttttatgaaaagaccatttttttatatgttcacgggtattataaactgaaacaaggtgac
atagaaggaaaaaaagaaatggaagatgcactaactatttttcaactgcttaacgaaaat
gccctgtatgatgcctatcaggaacactattataaacaagtctcagcgaatgctttgtaa
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