Streptococcus iniae SF1: K710_2019
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Entry
K710_2019 CDS
T02686
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sik
Streptococcus iniae SF1
Pathway
sik03030
DNA replication
sik03410
Base excision repair
sik03420
Nucleotide excision repair
sik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K710_2019
03410 Base excision repair
K710_2019
03420 Nucleotide excision repair
K710_2019
03440 Homologous recombination
K710_2019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sik03032
]
K710_2019
03400 DNA repair and recombination proteins [BR:
sik03400
]
K710_2019
Enzymes [BR:
sik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K710_2019
DNA replication proteins [BR:
sik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K710_2019
DNA repair and recombination proteins [BR:
sik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K710_2019
NER (nucleotide excision repair)
GGR (global genome repair) factors
K710_2019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DUF2764
Motif
Other DBs
NCBI-ProteinID:
AGM99761
LinkDB
All DBs
Position
complement(1965987..1968629)
Genome browser
AA seq
880 aa
AA seq
DB search
MDKKNRLLLIDGSSVAFRAFFALYNQIDRFKNQAGLHTNAIYGFHLMLDHMMKRVDPTHI
LVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQFPYIREMLTALGVPFYDLDNYEADDII
GTLDKMAERTEVPFDVTIVSGDKDLIQLTDENTVVEISKKGVAEFEEFTPAYLMEKMGLT
PAQFIDLKALMGDKSDNIPGVTKIGEKTGLKLLHEFGSLEGIYENVDGFKASKMKENLIN
DKEQAFLSKTLATINTTSPITIGLDDLAYKGPNLDTLAAFYEDMGFHQLRAGLAQTMPEA
EKEEINFQEVEQLTKEHFADDDVIYFEVLNENYHRESIAAFAWGNSQRIFVSENQELLKD
PLFKTFLAKPMATYDFKRAKVLLSHLEIAVPAAAYDARLANYLLSNVEDNELETIARLHT
TMTLASDEAVYGKGVKRAFPEKAIFLDHLARKVKVLVDSRATMLAKLEEHQQSELFTDIE
LPLANVLAKMEIAGIKVNKESLVDMAEQNKIIIESLTQEIYEMAGEEFNINSPKQLGVIL
FEKMQLPLEMTKKTKTGYSTAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYIM
SDGKIHTRYVQDLTQTGRLSSSDPNLQNIPVRLEQGRLIRKAFTASKEGSLLLSSDYSQI
ELRVLAHISGDQHLIAAFNEDADIHTSTAMRVFGIAKPEDVTANDRRNAKAVNFGIVYGI
SDFGLSNNLGISRKQAKDYIDTYFQQYPGIKSYMDTVVREAKDKGYVETLFKRRRELPEI
NSRNFNIRSFAERTAINSPIQGSAADILKIAMINLDKALADGQFESRMLLQVHDEIVLEV
PEAELPAIKALVKETMEAAVALSVPLRADENAGQSWYEAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaacagattattattaattgatggctcttcagtagcttttcgtgctttt
tttgcactttacaatcaaattgaccgctttaaaaatcaagcaggtctccacaccaatgcc
atctatggttttcatttgatgcttgaccatatgatgaaacgtgttgatcccactcatatc
ttagtggcatttgatgcaggcaaaacaacttttcgtacagaaatgtttgctgattacaag
gctggtcgtgctaaaactcctgaggaatttcgggagcaattcccttacatccgagaaatg
ctaacggctcttggagttcccttttatgacttagataattatgaagctgatgacattatc
ggaactttggataagatggctgaacgcacagaagtgccctttgacgttaccattgtcagc
ggtgataaggatttgatccagctaacagatgaaaatacggttgttgaaatttctaaaaaa
ggcgtagccgaatttgaagagttcacacccgcctatttgatggaaaaaatgggcttaacg
ccagcacaatttattgatttaaaagctcttatgggagacaaatcagataatattcctggt
gttactaagattggtgaaaaaacaggtttaaaattgcttcatgaatttggcagcctagaa
ggcatttatgagaatgttgatggctttaaggcgtcaaaaatgaaggaaaacttgataaat
gataaagaacaagccttcttatcaaaaactttggcgacaattaacaccacttcccccatc
acaattggcttggatgatcttgcttataagggaccaaatcttgacactttagctgccttt
tatgaggacatgggctttcatcaattaagagcaggtcttgctcaaactatgcctgaagct
gaaaaagaagaaatcaatttccaagaagtagagcaactgacaaaagagcatttcgcagat
gacgatgtgatttattttgaagtcttaaatgagaattatcaccgtgagtctattgctgct
tttgcatggggaaatagccagaggatttttgtttctgagaatcaagaattactcaaagac
ccattatttaaaacctttcttgctaaaccaatggcaacctatgattttaagagagcaaaa
gtgctcctaagccatttagagattgctgtgcctgcggctgcttatgatgcacgtttagct
aattacctcttgtctaatgttgaagataatgaactggaaacaattgctcgcctacacacg
acgatgacccttgcaagtgatgaagctgtatatggaaaaggtgtcaaacgggcctttcca
gaaaaagctattttccttgatcatttagcacgtaaagtaaaggtcttggttgatagcaga
gctactatgctagcgaaactagaagaacaccaacaatcagaactttttacggacattgaa
cttcctttagcgaacgtcttagctaaaatggaaattgctggcattaaggtcaataaagag
agcttagttgacatggcggagcaaaataaaataattattgaaagtctcacacaagaaatc
tatgagatggctggagaagaattcaatattaattcaccgaaacaactaggggttattctg
tttgaaaaaatgcagttgcctcttgaaatgaccaagaaaactaaaacgggttattcaaca
gcagttgatgttttggaacgcttagcacctattgcgccaattgtggctaagattttggac
taccgccaaatcaccaagttgcagtcaacttatgttattggtctacaagattacattatg
agtgatggtaaaatccacacccgttatgtgcaagatttgacacaaacaggtcgtttatca
agttcagatcctaacttgcaaaatattcctgttcgtctggaacaagggcgattaattcgt
aaagcctttacggcttcaaaagagggttctcttttgttaagttcggactattcacagatt
gaattgcgtgtgttagcacatatttcaggtgatcagcatttgattgctgcttttaatgaa
gatgctgatattcatacctcaacggctatgcgtgtttttggcattgcaaaaccagaagat
gtcacagctaatgaccgtcgcaatgctaaggctgtcaattttggcattgtgtatggtatt
tcagattttggcttgtcaaacaatttagggattagtcgtaaacaggccaaggactatatt
gatacttacttccaacagtacccaggcattaaatcatatatggatactgttgtccgcgaa
gctaaggacaaaggctacgtagaaaccttgtttaaacgccgtcgtgaattaccggagatt
aattctcgcaatttcaatatccgttcttttgcggagcgtacagccattaattcgcctatt
caaggcagcgcagccgatattcttaaaatcgcaatgattaatttggataaagctttggca
gatgggcagttcgagagtcgtatgcttttgcaggtgcatgatgagatagttcttgaggtc
ccagaggctgaattgcctgctattaaggctttggttaaggaaaccatggaagcggcagtt
gctctaagtgtacctttgagagctgatgaaaatgctggacaaagttggtatgaagcaaaa
taa
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